Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PHACTR1-201ENST00000332995 5332 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 ARL11-201ENST00000282026 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 ZNF148-207ENST00000492394 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 AC115619.1-201ENST00000567376 1605 ntBASIC9.61□□□□□ -0.87
LMO3Q8TAP4 SLITRK1-201ENST00000377084 5189 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 SPRR3-201ENST00000295367 878 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 CNOT9-202ENST00000295701 1126 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 Metazoa_SRP.3-201ENST00000366116 282 ntBASIC9.61□□□□□ -0.87
LMO3Q8TAP4 LRMDA-201ENST00000372499 899 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 CAV2-203ENST00000393480 1179 ntTSL 2 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 AL022329.1-201ENST00000412773 488 ntTSL 2 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 AC021016.1-201ENST00000414167 498 ntBASIC9.61□□□□□ -0.87
LMO3Q8TAP4 AC002076.1-201ENST00000435257 527 ntTSL 2 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 AC011228.1-201ENST00000439027 757 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 RPS29P3-201ENST00000439929 171 ntBASIC9.61□□□□□ -0.87
LMO3Q8TAP4 AL133387.1-201ENST00000442188 382 ntTSL 3 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 HNRNPCP10-201ENST00000457130 884 ntBASIC9.61□□□□□ -0.87
LMO3Q8TAP4 AC104619.1-201ENST00000459634 631 ntBASIC9.61□□□□□ -0.87
LMO3Q8TAP4 ARHGAP31-AS1-201ENST00000466292 624 ntTSL 4 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 OR7E121P-201ENST00000494533 1022 ntBASIC9.61□□□□□ -0.87
LMO3Q8TAP4 LINC01438-201ENST00000512794 556 ntTSL 4 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 ATP5L-202ENST00000524422 720 ntTSL 3 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 AL139300.2-201ENST00000556332 553 ntTSL 4 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 EIF4EBP1P1-201ENST00000557776 341 ntBASIC9.61□□□□□ -0.87
LMO3Q8TAP4 AC011939.1-201ENST00000567680 964 ntBASIC9.61□□□□□ -0.87
LMO3Q8TAP4 HSP90AB2P-202ENST00000602906 1277 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 AC048344.3-201ENST00000605512 251 ntBASIC9.61□□□□□ -0.87
LMO3Q8TAP4 AC009237.16-201ENST00000612987 506 ntBASIC9.61□□□□□ -0.87
LMO3Q8TAP4 LINC01697-206ENST00000616647 544 ntTSL 5 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 SMCR2_1.1-201ENST00000621493 157 ntBASIC9.61□□□□□ -0.87
LMO3Q8TAP4 CR381653.1-205ENST00000623409 580 ntTSL 5 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 SEM1-223ENST00000623498 582 ntTSL 5 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 AL356234.2-201ENST00000637996 1160 ntTSL 5 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 SLC24A1-203ENST00000399033 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 CD36-209ENST00000435819 2365 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 EFCAB10-205ENST00000486180 1550 ntAPPRIS P5 TSL 1 (best) BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 MLH1-216ENST00000458205 2608 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 PREPL-208ENST00000410081 3080 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 FAM122B-206ENST00000486347 1381 ntAPPRIS P3 TSL 2 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 LPAL2-205ENST00000639825 1536 ntTSL 5 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 POU6F2-210ENST00000559001 2403 ntTSL 5 BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 GPR82-201ENST00000302548 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 CSF3R-203ENST00000373103 3454 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
LMO3Q8TAP4 PHLDB2-207ENST00000477695 5813 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 FAM222B-201ENST00000341217 4033 ntTSL 5 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 ABI1-209ENST00000376166 3441 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 MTMR2-204ENST00000409459 3420 ntTSL 5 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 ADD3-203ENST00000360162 3114 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 CTNNA1-243ENST00000540387 2684 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 GALC-203ENST00000393569 2547 ntTSL 2 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 AC010320.4-201ENST00000594379 1905 ntTSL 2 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 TUBAP2-201ENST00000530835 1613 ntBASIC9.6□□□□□ -0.87
LMO3Q8TAP4 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 FAM111A-202ENST00000420244 3780 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 AL353583.1-201ENST00000624195 1855 ntBASIC9.6□□□□□ -0.87
LMO3Q8TAP4 PCDH11Y-202ENST00000333703 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 RSRC1-202ENST00000312179 1443 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 TNPO3-203ENST00000471234 3283 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 RIPPLY1-201ENST00000276173 1172 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 MIR345-201ENST00000362114 98 ntBASIC9.6□□□□□ -0.87
LMO3Q8TAP4 RNA5-8SP2-201ENST00000363564 152 ntBASIC9.6□□□□□ -0.87
LMO3Q8TAP4 ATP5HP4-201ENST00000414313 475 ntBASIC9.6□□□□□ -0.87
LMO3Q8TAP4 AC092810.3-201ENST00000416349 473 ntTSL 3 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 E2F4P1-201ENST00000422443 1133 ntBASIC9.6□□□□□ -0.87
LMO3Q8TAP4 AL355863.1-201ENST00000424331 293 ntBASIC9.6□□□□□ -0.87
LMO3Q8TAP4 LINC00385-201ENST00000435044 374 ntTSL 3 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 AC096732.1-201ENST00000439565 477 ntTSL 3 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 AC073583.1-201ENST00000447553 400 ntBASIC9.6□□□□□ -0.87
LMO3Q8TAP4 AL360181.1-201ENST00000452591 184 ntTSL 5 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 RN7SL370P-201ENST00000470869 295 ntBASIC9.6□□□□□ -0.87
LMO3Q8TAP4 GOT1L1-202ENST00000518826 497 ntTSL 2 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 RBM4B-207ENST00000531969 769 ntTSL 3 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 C12orf73-203ENST00000546540 590 ntTSL 2 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 AC009248.1-201ENST00000548155 735 ntBASIC9.6□□□□□ -0.87
LMO3Q8TAP4 AC087477.5-201ENST00000558246 562 ntTSL 3 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 AC118658.1-201ENST00000560221 334 ntTSL 5 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 RN7SL726P-201ENST00000605957 299 ntBASIC9.6□□□□□ -0.87
LMO3Q8TAP4 AC034198.2-201ENST00000606447 510 ntBASIC9.6□□□□□ -0.87
LMO3Q8TAP4 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC9.6□□□□□ -0.87
LMO3Q8TAP4 BSNDP3-201ENST00000617487 364 ntBASIC9.6□□□□□ -0.87
LMO3Q8TAP4 Metazoa_SRP.126-201ENST00000618354 266 ntBASIC9.6□□□□□ -0.87
LMO3Q8TAP4 TEX46-203ENST00000622840 479 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 AC011483.4-201ENST00000623621 585 ntBASIC9.6□□□□□ -0.87
LMO3Q8TAP4 MYO1H-201ENST00000310903 4364 ntTSL 5 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 FOLH1B-201ENST00000525540 1974 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 ELP3-219ENST00000537665 3053 ntTSL 2 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 GIGYF2-202ENST00000409196 5747 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 AC110769.2-201ENST00000602760 1548 ntBASIC9.6□□□□□ -0.87
LMO3Q8TAP4 ANO2-202ENST00000356134 3717 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 FOXR2-201ENST00000339140 1926 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 DHRS9-201ENST00000357546 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 CALD1-202ENST00000361901 4114 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 MTHFD2-203ENST00000409804 1757 ntTSL 5 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 AL354993.1-201ENST00000436286 3280 ntTSL 4 BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 RACGAP1-209ENST00000547905 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 TSC22D1-201ENST00000261489 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
LMO3Q8TAP4 EYA1-201ENST00000303824 3930 ntAPPRIS ALT1 TSL 2 BASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms