Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
S4R3C0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
S4R3C0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.15■□□□□ 0.18
S4R3C0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
S4R3C0 KRT16P2-201ENST00000414673 1423 ntBASIC16.15■□□□□ 0.18
S4R3C0 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.15■□□□□ 0.18
S4R3C0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.15■□□□□ 0.18
S4R3C0 AC245052.3-201ENST00000450182 901 ntBASIC16.15■□□□□ 0.18
S4R3C0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.15■□□□□ 0.18
S4R3C0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
S4R3C0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.15■□□□□ 0.18
S4R3C0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.15■□□□□ 0.18
S4R3C0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.15■□□□□ 0.18
S4R3C0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.15■□□□□ 0.18
S4R3C0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
S4R3C0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
S4R3C0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
S4R3C0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
S4R3C0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
S4R3C0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
S4R3C0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
S4R3C0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
S4R3C0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
S4R3C0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
S4R3C0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
S4R3C0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
S4R3C0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
S4R3C0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
S4R3C0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
S4R3C0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
S4R3C0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
S4R3C0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
S4R3C0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
S4R3C0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
S4R3C0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
S4R3C0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
S4R3C0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.14■□□□□ 0.17
S4R3C0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.14■□□□□ 0.17
S4R3C0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
S4R3C0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.14■□□□□ 0.17
S4R3C0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.14■□□□□ 0.17
S4R3C0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
S4R3C0 KRT18P5-201ENST00000436075 1291 ntBASIC16.14■□□□□ 0.17
S4R3C0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
S4R3C0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.14■□□□□ 0.17
S4R3C0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
S4R3C0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.14■□□□□ 0.17
S4R3C0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
S4R3C0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
S4R3C0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
S4R3C0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.14■□□□□ 0.17
S4R3C0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.14■□□□□ 0.17
S4R3C0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
S4R3C0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
S4R3C0 AL391422.3-201ENST00000603791 2761 ntBASIC16.14■□□□□ 0.17
S4R3C0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
S4R3C0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
S4R3C0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.13■□□□□ 0.17
S4R3C0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
S4R3C0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
S4R3C0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
S4R3C0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
S4R3C0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
S4R3C0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
S4R3C0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.13■□□□□ 0.17
S4R3C0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.13■□□□□ 0.17
S4R3C0 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.13■□□□□ 0.17
S4R3C0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.13■□□□□ 0.17
S4R3C0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.13■□□□□ 0.17
S4R3C0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.13■□□□□ 0.17
S4R3C0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
S4R3C0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
S4R3C0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
S4R3C0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
S4R3C0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
S4R3C0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
S4R3C0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.13■□□□□ 0.17
S4R3C0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
S4R3C0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.13■□□□□ 0.17
S4R3C0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
S4R3C0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
S4R3C0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
S4R3C0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
S4R3C0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
S4R3C0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
S4R3C0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.12■□□□□ 0.17
S4R3C0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
S4R3C0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
S4R3C0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
S4R3C0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.12■□□□□ 0.17
S4R3C0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
S4R3C0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
S4R3C0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
S4R3C0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
S4R3C0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.12■□□□□ 0.17
S4R3C0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.12■□□□□ 0.17
S4R3C0 MIR935-201ENST00000401179 91 ntBASIC16.12■□□□□ 0.17
S4R3C0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
S4R3C0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.12■□□□□ 0.17
S4R3C0 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms