Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PCDHGA6Q9Y5G7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA6Q9Y5G7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHGA6Q9Y5G7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 LINC01521-201ENST00000504184 1943 ntBASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 RARRES2P4-201ENST00000514074 484 ntBASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 RNA5SP413-201ENST00000516373 109 ntBASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 MYC-209ENST00000641252 345 ntBASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA6Q9Y5G7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 AC097658.1-201ENST00000475555 843 ntBASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PCDHGA6Q9Y5G7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA6Q9Y5G7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHGA6Q9Y5G7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHGA6Q9Y5G7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA6Q9Y5G7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PCDHGA6Q9Y5G7 AC010980.2-201ENST00000587099 1412 ntBASIC19.71■□□□□ 0.75
PCDHGA6Q9Y5G7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA6Q9Y5G7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDHGA6Q9Y5G7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
PCDHGA6Q9Y5G7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDHGA6Q9Y5G7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PCDHGA6Q9Y5G7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA6Q9Y5G7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA6Q9Y5G7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PCDHGA6Q9Y5G7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA6Q9Y5G7 AL121603.2-201ENST00000557373 2117 ntBASIC19.7■□□□□ 0.74
PCDHGA6Q9Y5G7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA6Q9Y5G7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA6Q9Y5G7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA6Q9Y5G7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA6Q9Y5G7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA6Q9Y5G7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHGA6Q9Y5G7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHGA6Q9Y5G7 AC083880.1-201ENST00000608266 535 ntBASIC19.7■□□□□ 0.74
PCDHGA6Q9Y5G7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA6Q9Y5G7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PCDHGA6Q9Y5G7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDHGA6Q9Y5G7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA6Q9Y5G7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA6Q9Y5G7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHGA6Q9Y5G7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA6Q9Y5G7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA6Q9Y5G7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA6Q9Y5G7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA6Q9Y5G7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA6Q9Y5G7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PCDHGA6Q9Y5G7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA6Q9Y5G7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHGA6Q9Y5G7 AC061975.6-201ENST00000579045 1553 ntBASIC19.69■□□□□ 0.74
PCDHGA6Q9Y5G7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 KRT18P29-201ENST00000397031 1267 ntBASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 AC091874.3-201ENST00000512672 1195 ntBASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 AC008687.6-201ENST00000596318 630 ntBASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA6Q9Y5G7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms