Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHB7Q9Y5E2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB7Q9Y5E2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDHB7Q9Y5E2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB7Q9Y5E2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB7Q9Y5E2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.17■■□□□ 1.14
PCDHB7Q9Y5E2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB7Q9Y5E2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHB7Q9Y5E2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB7Q9Y5E2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHB7Q9Y5E2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB7Q9Y5E2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB7Q9Y5E2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDHB7Q9Y5E2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB7Q9Y5E2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHB7Q9Y5E2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB7Q9Y5E2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHB7Q9Y5E2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHB7Q9Y5E2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.16■■□□□ 1.14
PCDHB7Q9Y5E2 AC120498.8-201ENST00000614275 531 ntBASIC22.16■■□□□ 1.14
PCDHB7Q9Y5E2 AL356652.1-201ENST00000615962 565 ntBASIC22.16■■□□□ 1.14
PCDHB7Q9Y5E2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB7Q9Y5E2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB7Q9Y5E2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB7Q9Y5E2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB7Q9Y5E2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB7Q9Y5E2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB7Q9Y5E2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PCDHB7Q9Y5E2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 AC233723.2-201ENST00000623798 2106 ntBASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 AC005829.2-201ENST00000571422 1056 ntBASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 AC006557.6-201ENST00000623071 864 ntBASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB7Q9Y5E2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHB7Q9Y5E2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHB7Q9Y5E2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHB7Q9Y5E2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHB7Q9Y5E2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
PCDHB7Q9Y5E2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB7Q9Y5E2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB7Q9Y5E2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
PCDHB7Q9Y5E2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
PCDHB7Q9Y5E2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
PCDHB7Q9Y5E2 AL390719.1-204ENST00000412397 1219 ntBASIC22.14■■□□□ 1.13
PCDHB7Q9Y5E2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDHB7Q9Y5E2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB7Q9Y5E2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB7Q9Y5E2 MTDHP1-201ENST00000605323 784 ntBASIC22.14■■□□□ 1.13
PCDHB7Q9Y5E2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDHB7Q9Y5E2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
PCDHB7Q9Y5E2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB7Q9Y5E2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB7Q9Y5E2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB7Q9Y5E2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB7Q9Y5E2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB7Q9Y5E2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB7Q9Y5E2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB7Q9Y5E2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB7Q9Y5E2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PCDHB7Q9Y5E2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB7Q9Y5E2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHB7Q9Y5E2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB7Q9Y5E2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHB7Q9Y5E2 SNORA78-201ENST00000459373 127 ntBASIC22.13■■□□□ 1.13
PCDHB7Q9Y5E2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHB7Q9Y5E2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.13■■□□□ 1.13
PCDHB7Q9Y5E2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.13■■□□□ 1.13
PCDHB7Q9Y5E2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.13■■□□□ 1.13
PCDHB7Q9Y5E2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB7Q9Y5E2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHB7Q9Y5E2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
PCDHB7Q9Y5E2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB7Q9Y5E2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB7Q9Y5E2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms