Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AL356441.2-201ENST00000443009 864 ntBASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 AC131281.2-201ENST00000520478 145 ntBASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 AC053503.5-201ENST00000601508 636 ntBASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 AC105233.4-201ENST00000642045 216 ntBASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.25□□□□□ -0.13
UBE2D4Q9Y2X8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 EEF1DP3-203ENST00000566025 782 ntBASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.24□□□□□ -0.13
UBE2D4Q9Y2X8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 SMG8-203ENST00000578922 2178 ntBASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 AC061975.6-201ENST00000579045 1553 ntBASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2D4Q9Y2X8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D4Q9Y2X8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms