Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.4■□□□□ 0.86
SCN8AQ9UQD0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCN8AQ9UQD0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCN8AQ9UQD0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCN8AQ9UQD0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.4■□□□□ 0.86
SCN8AQ9UQD0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.4■□□□□ 0.86
SCN8AQ9UQD0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SCN8AQ9UQD0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.4■□□□□ 0.86
SCN8AQ9UQD0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.4■□□□□ 0.86
SCN8AQ9UQD0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCN8AQ9UQD0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SCN8AQ9UQD0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCN8AQ9UQD0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCN8AQ9UQD0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SCN8AQ9UQD0 MCRIP2P1-201ENST00000394346 511 ntBASIC20.39■□□□□ 0.86
SCN8AQ9UQD0 AL512625.2-201ENST00000417533 625 ntBASIC20.39■□□□□ 0.86
SCN8AQ9UQD0 AC100791.3-201ENST00000617619 330 ntBASIC20.39■□□□□ 0.86
SCN8AQ9UQD0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
SCN8AQ9UQD0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCN8AQ9UQD0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
SCN8AQ9UQD0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SCN8AQ9UQD0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SCN8AQ9UQD0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.39■□□□□ 0.85
SCN8AQ9UQD0 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.39■□□□□ 0.85
SCN8AQ9UQD0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SCN8AQ9UQD0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SCN8AQ9UQD0 AC121338.2-201ENST00000622535 1744 ntBASIC20.39■□□□□ 0.85
SCN8AQ9UQD0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCN8AQ9UQD0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
SCN8AQ9UQD0 AP005212.1-201ENST00000581547 1997 ntBASIC20.39■□□□□ 0.85
SCN8AQ9UQD0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.39■□□□□ 0.85
SCN8AQ9UQD0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SCN8AQ9UQD0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCN8AQ9UQD0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCN8AQ9UQD0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.39■□□□□ 0.85
SCN8AQ9UQD0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.39■□□□□ 0.85
SCN8AQ9UQD0 AL121603.2-201ENST00000557373 2117 ntBASIC20.39■□□□□ 0.85
SCN8AQ9UQD0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SCN8AQ9UQD0 AC027702.1-201ENST00000563810 1770 ntBASIC20.39■□□□□ 0.85
SCN8AQ9UQD0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SCN8AQ9UQD0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN8AQ9UQD0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN8AQ9UQD0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN8AQ9UQD0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
SCN8AQ9UQD0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN8AQ9UQD0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SCN8AQ9UQD0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SCN8AQ9UQD0 DUSP5P2-201ENST00000426873 1033 ntBASIC20.38■□□□□ 0.85
SCN8AQ9UQD0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.38■□□□□ 0.85
SCN8AQ9UQD0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN8AQ9UQD0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN8AQ9UQD0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN8AQ9UQD0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN8AQ9UQD0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.38■□□□□ 0.85
SCN8AQ9UQD0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN8AQ9UQD0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.38■□□□□ 0.85
SCN8AQ9UQD0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.38■□□□□ 0.85
SCN8AQ9UQD0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCN8AQ9UQD0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SCN8AQ9UQD0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SCN8AQ9UQD0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SCN8AQ9UQD0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
SCN8AQ9UQD0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCN8AQ9UQD0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SCN8AQ9UQD0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCN8AQ9UQD0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.37■□□□□ 0.85
SCN8AQ9UQD0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCN8AQ9UQD0 AC007225.1-201ENST00000566331 1836 ntBASIC20.37■□□□□ 0.85
SCN8AQ9UQD0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.37■□□□□ 0.85
SCN8AQ9UQD0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
SCN8AQ9UQD0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.37■□□□□ 0.85
SCN8AQ9UQD0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCN8AQ9UQD0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
SCN8AQ9UQD0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCN8AQ9UQD0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 PGM5P4-201ENST00000421970 445 ntBASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 AC073314.1-201ENST00000568729 2216 ntBASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.36■□□□□ 0.85
SCN8AQ9UQD0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN8AQ9UQD0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SCN8AQ9UQD0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.35■□□□□ 0.85
SCN8AQ9UQD0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN8AQ9UQD0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN8AQ9UQD0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN8AQ9UQD0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms