Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
UBQLN1Q9UMX0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
UBQLN1Q9UMX0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
UBQLN1Q9UMX0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 AC026310.3-201ENST00000625186 2373 ntBASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 RNA5SP413-201ENST00000516373 109 ntBASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 AL356652.1-201ENST00000615962 565 ntBASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 AC027702.1-201ENST00000563810 1770 ntBASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.06■■□□□ 1.12
UBQLN1Q9UMX0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
UBQLN1Q9UMX0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
UBQLN1Q9UMX0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
UBQLN1Q9UMX0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
UBQLN1Q9UMX0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
UBQLN1Q9UMX0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
UBQLN1Q9UMX0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
UBQLN1Q9UMX0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
UBQLN1Q9UMX0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.05■■□□□ 1.12
UBQLN1Q9UMX0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.05■■□□□ 1.12
UBQLN1Q9UMX0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
UBQLN1Q9UMX0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.05■■□□□ 1.12
UBQLN1Q9UMX0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
UBQLN1Q9UMX0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.05■■□□□ 1.12
UBQLN1Q9UMX0 AF106564.1-201ENST00000607058 2553 ntBASIC22.04■■□□□ 1.12
UBQLN1Q9UMX0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
UBQLN1Q9UMX0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
UBQLN1Q9UMX0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
UBQLN1Q9UMX0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
UBQLN1Q9UMX0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
UBQLN1Q9UMX0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
UBQLN1Q9UMX0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.04■■□□□ 1.12
UBQLN1Q9UMX0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.04■■□□□ 1.12
UBQLN1Q9UMX0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
UBQLN1Q9UMX0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
UBQLN1Q9UMX0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.04■■□□□ 1.12
UBQLN1Q9UMX0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.04■■□□□ 1.12
UBQLN1Q9UMX0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
UBQLN1Q9UMX0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
UBQLN1Q9UMX0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.02■■□□□ 1.12
UBQLN1Q9UMX0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
UBQLN1Q9UMX0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
UBQLN1Q9UMX0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
UBQLN1Q9UMX0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
UBQLN1Q9UMX0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.02■■□□□ 1.12
UBQLN1Q9UMX0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
UBQLN1Q9UMX0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.02■■□□□ 1.12
UBQLN1Q9UMX0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.02■■□□□ 1.12
UBQLN1Q9UMX0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.11
UBQLN1Q9UMX0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
UBQLN1Q9UMX0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms