Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 AC069544.1-201ENST00000609399 999 ntBASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NOTCH3Q9UM47 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.77■□□□□ 0.12
NOTCH3Q9UM47 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NOTCH3Q9UM47 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NOTCH3Q9UM47 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.77■□□□□ 0.12
NOTCH3Q9UM47 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.77■□□□□ 0.12
NOTCH3Q9UM47 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NOTCH3Q9UM47 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NOTCH3Q9UM47 AC233263.1-201ENST00000578059 224 ntBASIC15.77■□□□□ 0.12
NOTCH3Q9UM47 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.77■□□□□ 0.12
NOTCH3Q9UM47 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NOTCH3Q9UM47 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
NOTCH3Q9UM47 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NOTCH3Q9UM47 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.77■□□□□ 0.11
NOTCH3Q9UM47 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.77■□□□□ 0.11
NOTCH3Q9UM47 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NOTCH3Q9UM47 RPPH1-201ENST00000516869 333 ntBASIC15.77■□□□□ 0.11
NOTCH3Q9UM47 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 CYP2T3P-201ENST00000601990 817 ntBASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 AC245052.3-201ENST00000450182 901 ntBASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.76■□□□□ 0.11
NOTCH3Q9UM47 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 POM121L13P-201ENST00000422362 380 ntBASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NOTCH3Q9UM47 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NOTCH3Q9UM47 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms