Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN1Q9P244 ITM2C-210ENST00000620962 501 ntBASIC18.85■□□□□ 0.61
LRFN1Q9P244 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LRFN1Q9P244 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN1Q9P244 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN1Q9P244 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRFN1Q9P244 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.85■□□□□ 0.61
LRFN1Q9P244 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN1Q9P244 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN1Q9P244 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN1Q9P244 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN1Q9P244 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN1Q9P244 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.84■□□□□ 0.61
LRFN1Q9P244 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LRFN1Q9P244 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.84■□□□□ 0.61
LRFN1Q9P244 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.84■□□□□ 0.61
LRFN1Q9P244 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.84■□□□□ 0.61
LRFN1Q9P244 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.84■□□□□ 0.61
LRFN1Q9P244 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.84■□□□□ 0.61
LRFN1Q9P244 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN1Q9P244 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN1Q9P244 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN1Q9P244 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN1Q9P244 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN1Q9P244 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN1Q9P244 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN1Q9P244 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN1Q9P244 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRFN1Q9P244 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.84■□□□□ 0.61
LRFN1Q9P244 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
LRFN1Q9P244 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
LRFN1Q9P244 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
LRFN1Q9P244 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LRFN1Q9P244 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
LRFN1Q9P244 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRFN1Q9P244 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
LRFN1Q9P244 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LRFN1Q9P244 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRFN1Q9P244 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRFN1Q9P244 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.83■□□□□ 0.61
LRFN1Q9P244 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRFN1Q9P244 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRFN1Q9P244 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.83■□□□□ 0.6
LRFN1Q9P244 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LRFN1Q9P244 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LRFN1Q9P244 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.83■□□□□ 0.6
LRFN1Q9P244 AC105020.6-201ENST00000621523 1217 ntBASIC18.83■□□□□ 0.6
LRFN1Q9P244 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRFN1Q9P244 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRFN1Q9P244 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRFN1Q9P244 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRFN1Q9P244 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LRFN1Q9P244 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.83■□□□□ 0.6
LRFN1Q9P244 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.83■□□□□ 0.6
LRFN1Q9P244 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN1Q9P244 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN1Q9P244 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
LRFN1Q9P244 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN1Q9P244 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN1Q9P244 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.82■□□□□ 0.6
LRFN1Q9P244 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LRFN1Q9P244 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.82■□□□□ 0.6
LRFN1Q9P244 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.82■□□□□ 0.6
LRFN1Q9P244 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.82■□□□□ 0.6
LRFN1Q9P244 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.82■□□□□ 0.6
LRFN1Q9P244 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.82■□□□□ 0.6
LRFN1Q9P244 UNC93B5-201ENST00000530315 699 ntBASIC18.82■□□□□ 0.6
LRFN1Q9P244 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.82■□□□□ 0.6
LRFN1Q9P244 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.82■□□□□ 0.6
LRFN1Q9P244 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.82■□□□□ 0.6
LRFN1Q9P244 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN1Q9P244 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.82■□□□□ 0.6
LRFN1Q9P244 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.82■□□□□ 0.6
LRFN1Q9P244 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN1Q9P244 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRFN1Q9P244 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.82■□□□□ 0.6
LRFN1Q9P244 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
LRFN1Q9P244 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LRFN1Q9P244 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN1Q9P244 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN1Q9P244 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.81■□□□□ 0.6
LRFN1Q9P244 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN1Q9P244 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN1Q9P244 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.81■□□□□ 0.6
LRFN1Q9P244 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN1Q9P244 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LRFN1Q9P244 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.81■□□□□ 0.6
LRFN1Q9P244 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.81■□□□□ 0.6
LRFN1Q9P244 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.81■□□□□ 0.6
LRFN1Q9P244 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.81■□□□□ 0.6
LRFN1Q9P244 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.81■□□□□ 0.6
LRFN1Q9P244 AC060766.5-201ENST00000590539 871 ntBASIC18.81■□□□□ 0.6
LRFN1Q9P244 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LRFN1Q9P244 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN1Q9P244 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN1Q9P244 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.81■□□□□ 0.6
LRFN1Q9P244 HLA-B-256ENST00000639848 1089 ntBASIC18.81■□□□□ 0.6
LRFN1Q9P244 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LRFN1Q9P244 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRFN1Q9P244 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms