Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
UBP1Q9NZI7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.89■□□□□ 0.93
UBP1Q9NZI7 TERF1P5-201ENST00000477545 1207 ntBASIC20.89■□□□□ 0.93
UBP1Q9NZI7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
UBP1Q9NZI7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
UBP1Q9NZI7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
UBP1Q9NZI7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.89■□□□□ 0.93
UBP1Q9NZI7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.89■□□□□ 0.93
UBP1Q9NZI7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBP1Q9NZI7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBP1Q9NZI7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBP1Q9NZI7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 KRT18P11-201ENST00000435214 1283 ntBASIC20.88■□□□□ 0.93
UBP1Q9NZI7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 IKBKGP1-201ENST00000612193 1073 ntBASIC20.88■□□□□ 0.93
UBP1Q9NZI7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBP1Q9NZI7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBP1Q9NZI7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBP1Q9NZI7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBP1Q9NZI7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBP1Q9NZI7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBP1Q9NZI7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.87■□□□□ 0.93
UBP1Q9NZI7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.87■□□□□ 0.93
UBP1Q9NZI7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.87■□□□□ 0.93
UBP1Q9NZI7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
UBP1Q9NZI7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBP1Q9NZI7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
UBP1Q9NZI7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBP1Q9NZI7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.87■□□□□ 0.93
UBP1Q9NZI7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
UBP1Q9NZI7 AL121603.2-201ENST00000557373 2117 ntBASIC20.87■□□□□ 0.93
UBP1Q9NZI7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBP1Q9NZI7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
UBP1Q9NZI7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBP1Q9NZI7 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.86■□□□□ 0.93
UBP1Q9NZI7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.86■□□□□ 0.93
UBP1Q9NZI7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBP1Q9NZI7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBP1Q9NZI7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBP1Q9NZI7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.86■□□□□ 0.93
UBP1Q9NZI7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBP1Q9NZI7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
UBP1Q9NZI7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBP1Q9NZI7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBP1Q9NZI7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
UBP1Q9NZI7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
UBP1Q9NZI7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UBP1Q9NZI7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
UBP1Q9NZI7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UBP1Q9NZI7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.85■□□□□ 0.93
UBP1Q9NZI7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UBP1Q9NZI7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
UBP1Q9NZI7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
UBP1Q9NZI7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
UBP1Q9NZI7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.85■□□□□ 0.93
UBP1Q9NZI7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBP1Q9NZI7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.85■□□□□ 0.93
UBP1Q9NZI7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UBP1Q9NZI7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.85■□□□□ 0.93
UBP1Q9NZI7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.85■□□□□ 0.93
UBP1Q9NZI7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UBP1Q9NZI7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.85■□□□□ 0.93
UBP1Q9NZI7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
UBP1Q9NZI7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UBP1Q9NZI7 AC027702.1-201ENST00000563810 1770 ntBASIC20.85■□□□□ 0.93
UBP1Q9NZI7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBP1Q9NZI7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.84■□□□□ 0.93
UBP1Q9NZI7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBP1Q9NZI7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.84■□□□□ 0.93
UBP1Q9NZI7 AC007322.3-201ENST00000426526 701 ntBASIC20.84■□□□□ 0.93
UBP1Q9NZI7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
UBP1Q9NZI7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
UBP1Q9NZI7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBP1Q9NZI7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBP1Q9NZI7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBP1Q9NZI7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.83■□□□□ 0.93
UBP1Q9NZI7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBP1Q9NZI7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBP1Q9NZI7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.83■□□□□ 0.93
UBP1Q9NZI7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBP1Q9NZI7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBP1Q9NZI7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBP1Q9NZI7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms