Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PARPBPQ9NWS1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PARPBPQ9NWS1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PARPBPQ9NWS1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PARPBPQ9NWS1 AC006970.2-201ENST00000450065 779 ntBASIC18.32■□□□□ 0.52
PARPBPQ9NWS1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.32■□□□□ 0.52
PARPBPQ9NWS1 FAM21FP-204ENST00000608637 956 ntBASIC18.32■□□□□ 0.52
PARPBPQ9NWS1 OR10C1-204ENST00000622521 1039 ntBASIC18.32■□□□□ 0.52
PARPBPQ9NWS1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.32■□□□□ 0.52
PARPBPQ9NWS1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.32■□□□□ 0.52
PARPBPQ9NWS1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PARPBPQ9NWS1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PARPBPQ9NWS1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PARPBPQ9NWS1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PARPBPQ9NWS1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PARPBPQ9NWS1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.32■□□□□ 0.52
PARPBPQ9NWS1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 AC090192.1-201ENST00000517740 490 ntBASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PARPBPQ9NWS1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 AC011484.1-201ENST00000377652 1995 ntBASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 AC133552.2-202ENST00000575694 574 ntBASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.3■□□□□ 0.52
PARPBPQ9NWS1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PARPBPQ9NWS1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PARPBPQ9NWS1 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.29■□□□□ 0.52
PARPBPQ9NWS1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PARPBPQ9NWS1 RARRES2P4-201ENST00000514074 484 ntBASIC18.29■□□□□ 0.52
PARPBPQ9NWS1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.29■□□□□ 0.52
PARPBPQ9NWS1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PARPBPQ9NWS1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PARPBPQ9NWS1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PARPBPQ9NWS1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PARPBPQ9NWS1 AC121338.2-201ENST00000622535 1744 ntBASIC18.29■□□□□ 0.52
PARPBPQ9NWS1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 MIR663A-201ENST00000385250 93 ntBASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 AL512625.2-201ENST00000417533 625 ntBASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 CYP2T1P-201ENST00000432607 1285 ntBASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 CROCCP5-201ENST00000436658 830 ntBASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 RNF165-205ENST00000588679 2904 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms