Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.78■□□□□ 0.92
ABCF3Q9NUQ8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
ABCF3Q9NUQ8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.77■□□□□ 0.92
ABCF3Q9NUQ8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ABCF3Q9NUQ8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.77■□□□□ 0.92
ABCF3Q9NUQ8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ABCF3Q9NUQ8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ABCF3Q9NUQ8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ABCF3Q9NUQ8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ABCF3Q9NUQ8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.77■□□□□ 0.91
ABCF3Q9NUQ8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.77■□□□□ 0.91
ABCF3Q9NUQ8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.77■□□□□ 0.91
ABCF3Q9NUQ8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 PLK5-205ENST00000642079 1969 ntBASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 BX005040.4-201ENST00000637145 1518 ntBASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ABCF3Q9NUQ8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 AL034346.1-201ENST00000568244 1277 ntBASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 AL354811.1-201ENST00000610286 706 ntBASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 AL358852.1-201ENST00000623174 1268 ntBASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 SMG8-203ENST00000578922 2178 ntBASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ABCF3Q9NUQ8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.74■□□□□ 0.91
ABCF3Q9NUQ8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCF3Q9NUQ8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ABCF3Q9NUQ8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms