Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 AC055733.4-201ENST00000638462 1354 ntBASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIN7CQ9NUP9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LIN7CQ9NUP9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17■□□□□ 0.31
LIN7CQ9NUP9 AC027702.1-201ENST00000563810 1770 ntBASIC17■□□□□ 0.31
LIN7CQ9NUP9 AC020907.5-201ENST00000624372 1936 ntBASIC17■□□□□ 0.31
LIN7CQ9NUP9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17■□□□□ 0.31
LIN7CQ9NUP9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIN7CQ9NUP9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LIN7CQ9NUP9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIN7CQ9NUP9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIN7CQ9NUP9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LIN7CQ9NUP9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17■□□□□ 0.31
LIN7CQ9NUP9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
LIN7CQ9NUP9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17■□□□□ 0.31
LIN7CQ9NUP9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17■□□□□ 0.31
LIN7CQ9NUP9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LIN7CQ9NUP9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17■□□□□ 0.31
LIN7CQ9NUP9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17■□□□□ 0.31
LIN7CQ9NUP9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17■□□□□ 0.31
LIN7CQ9NUP9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17■□□□□ 0.31
LIN7CQ9NUP9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17■□□□□ 0.31
LIN7CQ9NUP9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17■□□□□ 0.31
LIN7CQ9NUP9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
LIN7CQ9NUP9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
LIN7CQ9NUP9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17■□□□□ 0.31
LIN7CQ9NUP9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIN7CQ9NUP9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LIN7CQ9NUP9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 AC034268.1-201ENST00000441047 882 ntBASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 CCDC92B-201ENST00000575506 885 ntBASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 MIR5787-201ENST00000611784 55 ntBASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIN7CQ9NUP9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 KRT18P14-201ENST00000534205 1250 ntBASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LIN7CQ9NUP9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.97■□□□□ 0.31
LIN7CQ9NUP9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms