Protein–RNA interactions for Protein: Q9NQG5

RPRD1B, Regulation of nuclear pre-mRNA domain-containing protein 1B, humanhuman

Known RBP Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1BQ9NQG5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 AC006128.1-201ENST00000624704 1661 ntBASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 FEM1AP1-201ENST00000431297 1995 ntBASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 AL136967.2-201ENST00000623968 743 ntBASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
RPRD1BQ9NQG5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 AL031432.3-201ENST00000607698 485 ntBASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPRD1BQ9NQG5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
RPRD1BQ9NQG5 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RPRD1BQ9NQG5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RPRD1BQ9NQG5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPRD1BQ9NQG5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1BQ9NQG5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1BQ9NQG5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1BQ9NQG5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1BQ9NQG5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.62■□□□□ 0.57
RPRD1BQ9NQG5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.62■□□□□ 0.57
RPRD1BQ9NQG5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.62■□□□□ 0.57
RPRD1BQ9NQG5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPRD1BQ9NQG5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.62■□□□□ 0.57
RPRD1BQ9NQG5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.62■□□□□ 0.57
RPRD1BQ9NQG5 AC012414.1-201ENST00000556676 535 ntBASIC18.62■□□□□ 0.57
RPRD1BQ9NQG5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RPRD1BQ9NQG5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.62■□□□□ 0.57
RPRD1BQ9NQG5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms