Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
RC3H2Q9HBD1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RC3H2Q9HBD1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.06■■□□□ 1.12
RC3H2Q9HBD1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 AC110285.5-201ENST00000611501 352 ntBASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 AC113410.3-201ENST00000623366 203 ntBASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 KRT17P2-201ENST00000300992 1314 ntBASIC22.05■■□□□ 1.12
RC3H2Q9HBD1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RC3H2Q9HBD1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.04■■□□□ 1.12
RC3H2Q9HBD1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RC3H2Q9HBD1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RC3H2Q9HBD1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
RC3H2Q9HBD1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RC3H2Q9HBD1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RC3H2Q9HBD1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.04■■□□□ 1.12
RC3H2Q9HBD1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
RC3H2Q9HBD1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RC3H2Q9HBD1 AC006557.6-201ENST00000623071 864 ntBASIC22.04■■□□□ 1.12
RC3H2Q9HBD1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
RC3H2Q9HBD1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.04■■□□□ 1.12
RC3H2Q9HBD1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RC3H2Q9HBD1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RC3H2Q9HBD1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RC3H2Q9HBD1 C9orf163-202ENST00000624034 2573 ntBASIC22.03■■□□□ 1.12
RC3H2Q9HBD1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.03■■□□□ 1.12
RC3H2Q9HBD1 TSPY15P-201ENST00000457163 923 ntBASIC22.03■■□□□ 1.12
RC3H2Q9HBD1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.03■■□□□ 1.12
RC3H2Q9HBD1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.03■■□□□ 1.12
RC3H2Q9HBD1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.03■■□□□ 1.12
RC3H2Q9HBD1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.03■■□□□ 1.12
RC3H2Q9HBD1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RC3H2Q9HBD1 AL135905.2-201ENST00000584934 1404 ntBASIC22.03■■□□□ 1.12
RC3H2Q9HBD1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.03■■□□□ 1.12
RC3H2Q9HBD1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RC3H2Q9HBD1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RC3H2Q9HBD1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RC3H2Q9HBD1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RC3H2Q9HBD1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
RC3H2Q9HBD1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
RC3H2Q9HBD1 KRASP1-201ENST00000407852 552 ntBASIC22.02■■□□□ 1.12
RC3H2Q9HBD1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RC3H2Q9HBD1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RC3H2Q9HBD1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RC3H2Q9HBD1 AC010331.1-201ENST00000611423 582 ntBASIC22.02■■□□□ 1.12
RC3H2Q9HBD1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RC3H2Q9HBD1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RC3H2Q9HBD1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RC3H2Q9HBD1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RC3H2Q9HBD1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
RC3H2Q9HBD1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 PGM5P4-201ENST00000421970 445 ntBASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 RARRES2P10-201ENST00000564312 460 ntBASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 MIR4785-201ENST00000585005 73 ntBASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 AP001412.1-201ENST00000608405 714 ntBASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 AC012306.2-201ENST00000609350 630 ntBASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 AL356652.1-201ENST00000615962 565 ntBASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.01■■□□□ 1.11
RC3H2Q9HBD1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RC3H2Q9HBD1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
RC3H2Q9HBD1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22■■□□□ 1.11
RC3H2Q9HBD1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22■■□□□ 1.11
RC3H2Q9HBD1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
RC3H2Q9HBD1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms