Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLK4Q9HAZ1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
CLK4Q9HAZ1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLK4Q9HAZ1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLK4Q9HAZ1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.88■□□□□ 0.77
CLK4Q9HAZ1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLK4Q9HAZ1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLK4Q9HAZ1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLK4Q9HAZ1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.88■□□□□ 0.77
CLK4Q9HAZ1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLK4Q9HAZ1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.88■□□□□ 0.77
CLK4Q9HAZ1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.88■□□□□ 0.77
CLK4Q9HAZ1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.88■□□□□ 0.77
CLK4Q9HAZ1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.88■□□□□ 0.77
CLK4Q9HAZ1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.88■□□□□ 0.77
CLK4Q9HAZ1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLK4Q9HAZ1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
CLK4Q9HAZ1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CLK4Q9HAZ1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CLK4Q9HAZ1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CLK4Q9HAZ1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.87■□□□□ 0.77
CLK4Q9HAZ1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CLK4Q9HAZ1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLK4Q9HAZ1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.86■□□□□ 0.77
CLK4Q9HAZ1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLK4Q9HAZ1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.86■□□□□ 0.77
CLK4Q9HAZ1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLK4Q9HAZ1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLK4Q9HAZ1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLK4Q9HAZ1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.86■□□□□ 0.77
CLK4Q9HAZ1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLK4Q9HAZ1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLK4Q9HAZ1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLK4Q9HAZ1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
CLK4Q9HAZ1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.86■□□□□ 0.77
CLK4Q9HAZ1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.86■□□□□ 0.77
CLK4Q9HAZ1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.86■□□□□ 0.77
CLK4Q9HAZ1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLK4Q9HAZ1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLK4Q9HAZ1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK4Q9HAZ1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLK4Q9HAZ1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLK4Q9HAZ1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK4Q9HAZ1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK4Q9HAZ1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK4Q9HAZ1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.85■□□□□ 0.77
CLK4Q9HAZ1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.85■□□□□ 0.77
CLK4Q9HAZ1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CLK4Q9HAZ1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.85■□□□□ 0.77
CLK4Q9HAZ1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.85■□□□□ 0.77
CLK4Q9HAZ1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK4Q9HAZ1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.85■□□□□ 0.77
CLK4Q9HAZ1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLK4Q9HAZ1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLK4Q9HAZ1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CLK4Q9HAZ1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK4Q9HAZ1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLK4Q9HAZ1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 AL137784.2-201ENST00000607332 1000 ntBASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 MYCNOS-205ENST00000641950 531 ntBASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK4Q9HAZ1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms