Protein–RNA interactions for Protein: Q9H6R3

ACSS3, Acyl-CoA synthetase short-chain family member 3, mitochondrial, humanhuman

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS3Q9H6R3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.64■□□□□ 0.9
ACSS3Q9H6R3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACSS3Q9H6R3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACSS3Q9H6R3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
ACSS3Q9H6R3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.64■□□□□ 0.89
ACSS3Q9H6R3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACSS3Q9H6R3 MIR939-201ENST00000401314 82 ntBASIC20.64■□□□□ 0.89
ACSS3Q9H6R3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACSS3Q9H6R3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.64■□□□□ 0.89
ACSS3Q9H6R3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.64■□□□□ 0.89
ACSS3Q9H6R3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.64■□□□□ 0.89
ACSS3Q9H6R3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.64■□□□□ 0.89
ACSS3Q9H6R3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ACSS3Q9H6R3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACSS3Q9H6R3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ACSS3Q9H6R3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ACSS3Q9H6R3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ACSS3Q9H6R3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ACSS3Q9H6R3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ACSS3Q9H6R3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ACSS3Q9H6R3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.63■□□□□ 0.89
ACSS3Q9H6R3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACSS3Q9H6R3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACSS3Q9H6R3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ACSS3Q9H6R3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACSS3Q9H6R3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACSS3Q9H6R3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACSS3Q9H6R3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACSS3Q9H6R3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.63■□□□□ 0.89
ACSS3Q9H6R3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.63■□□□□ 0.89
ACSS3Q9H6R3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ACSS3Q9H6R3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACSS3Q9H6R3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 AF213884.3-201ENST00000563833 479 ntBASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 AL355001.2-201ENST00000620617 1191 ntBASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACSS3Q9H6R3 KRT16P2-201ENST00000414673 1423 ntBASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 AC091305.1-201ENST00000479476 895 ntBASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ACSS3Q9H6R3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ACSS3Q9H6R3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.6■□□□□ 0.89
ACSS3Q9H6R3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACSS3Q9H6R3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACSS3Q9H6R3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACSS3Q9H6R3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACSS3Q9H6R3 AC245052.3-201ENST00000450182 901 ntBASIC20.6■□□□□ 0.89
ACSS3Q9H6R3 AL354811.1-201ENST00000610286 706 ntBASIC20.6■□□□□ 0.89
ACSS3Q9H6R3 MIR2861-201ENST00000636310 90 ntBASIC20.6■□□□□ 0.89
ACSS3Q9H6R3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ACSS3Q9H6R3 KRT87P-202ENST00000534226 1464 ntBASIC20.6■□□□□ 0.89
ACSS3Q9H6R3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACSS3Q9H6R3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACSS3Q9H6R3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.6■□□□□ 0.89
ACSS3Q9H6R3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
ACSS3Q9H6R3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACSS3Q9H6R3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACSS3Q9H6R3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ACSS3Q9H6R3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ACSS3Q9H6R3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACSS3Q9H6R3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ACSS3Q9H6R3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACSS3Q9H6R3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.59■□□□□ 0.89
ACSS3Q9H6R3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACSS3Q9H6R3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ACSS3Q9H6R3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms