Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATXN3LQ9H3M9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATXN3LQ9H3M9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATXN3LQ9H3M9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.56■■□□□ 1.04
ATXN3LQ9H3M9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.56■■□□□ 1.04
ATXN3LQ9H3M9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.56■■□□□ 1.04
ATXN3LQ9H3M9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.56■■□□□ 1.04
ATXN3LQ9H3M9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.56■■□□□ 1.04
ATXN3LQ9H3M9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATXN3LQ9H3M9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ATXN3LQ9H3M9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATXN3LQ9H3M9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.56■■□□□ 1.04
ATXN3LQ9H3M9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN3LQ9H3M9 PKD1P6-201ENST00000343738 4769 ntBASIC21.55■■□□□ 1.04
ATXN3LQ9H3M9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.55■■□□□ 1.04
ATXN3LQ9H3M9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN3LQ9H3M9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN3LQ9H3M9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN3LQ9H3M9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
ATXN3LQ9H3M9 HLA-B-256ENST00000639848 1089 ntBASIC21.55■■□□□ 1.04
ATXN3LQ9H3M9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN3LQ9H3M9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ATXN3LQ9H3M9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN3LQ9H3M9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.55■■□□□ 1.04
ATXN3LQ9H3M9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN3LQ9H3M9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN3LQ9H3M9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
ATXN3LQ9H3M9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN3LQ9H3M9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN3LQ9H3M9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATXN3LQ9H3M9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 GCSHP5-201ENST00000443090 522 ntBASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 AC142381.4-202ENST00000563973 229 ntBASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.54■■□□□ 1.04
ATXN3LQ9H3M9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 AL158047.1-201ENST00000445918 881 ntBASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 AC073648.6-201ENST00000641589 218 ntBASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.53■■□□□ 1.04
ATXN3LQ9H3M9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN3LQ9H3M9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN3LQ9H3M9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN3LQ9H3M9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
ATXN3LQ9H3M9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.52■■□□□ 1.04
ATXN3LQ9H3M9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN3LQ9H3M9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN3LQ9H3M9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN3LQ9H3M9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.52■■□□□ 1.04
ATXN3LQ9H3M9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN3LQ9H3M9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATXN3LQ9H3M9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
ATXN3LQ9H3M9 AC244015.2-201ENST00000616358 1861 ntBASIC21.52■■□□□ 1.03
ATXN3LQ9H3M9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATXN3LQ9H3M9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
ATXN3LQ9H3M9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN3LQ9H3M9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN3LQ9H3M9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN3LQ9H3M9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.51■■□□□ 1.03
ATXN3LQ9H3M9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN3LQ9H3M9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN3LQ9H3M9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN3LQ9H3M9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.51■■□□□ 1.03
ATXN3LQ9H3M9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.51■■□□□ 1.03
ATXN3LQ9H3M9 PNMA6B-201ENST00000538162 1200 ntBASIC21.51■■□□□ 1.03
ATXN3LQ9H3M9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
ATXN3LQ9H3M9 AP006294.2-201ENST00000641667 209 ntBASIC21.51■■□□□ 1.03
ATXN3LQ9H3M9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN3LQ9H3M9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATXN3LQ9H3M9 AC092368.3-202ENST00000574180 1591 ntBASIC21.51■■□□□ 1.03
ATXN3LQ9H3M9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms