Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CCDC68Q9H2F9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC68Q9H2F9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC68Q9H2F9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC68Q9H2F9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC68Q9H2F9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC68Q9H2F9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CCDC68Q9H2F9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC68Q9H2F9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC68Q9H2F9 AC097381.1-201ENST00000429019 1296 ntBASIC20.49■□□□□ 0.87
CCDC68Q9H2F9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CCDC68Q9H2F9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC68Q9H2F9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC68Q9H2F9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.49■□□□□ 0.87
CCDC68Q9H2F9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC68Q9H2F9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC68Q9H2F9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC68Q9H2F9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC68Q9H2F9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC68Q9H2F9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC68Q9H2F9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC68Q9H2F9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 NTF6G-201ENST00000591094 616 ntBASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC68Q9H2F9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 SLC7A5P1-201ENST00000568957 537 ntBASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 MIR6821-201ENST00000617625 74 ntBASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 AL157384.1-201ENST00000445995 2473 ntBASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 AC007225.1-201ENST00000566331 1836 ntBASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC68Q9H2F9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CCDC68Q9H2F9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 FEM1AP1-201ENST00000431297 1995 ntBASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 AC116050.2-201ENST00000612102 1779 ntBASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms