Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDH23Q9H251 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC22.02■■□□□ 1.12
CDH23Q9H251 KRT126P-201ENST00000549467 1181 ntBASIC22.02■■□□□ 1.12
CDH23Q9H251 AC005829.2-201ENST00000571422 1056 ntBASIC22.02■■□□□ 1.12
CDH23Q9H251 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDH23Q9H251 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.02■■□□□ 1.12
CDH23Q9H251 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDH23Q9H251 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.02■■□□□ 1.12
CDH23Q9H251 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.02■■□□□ 1.12
CDH23Q9H251 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDH23Q9H251 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDH23Q9H251 AC110285.5-201ENST00000611501 352 ntBASIC22.02■■□□□ 1.12
CDH23Q9H251 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CDH23Q9H251 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.02■■□□□ 1.12
CDH23Q9H251 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDH23Q9H251 AC079598.2-202ENST00000546624 1451 ntBASIC22.02■■□□□ 1.11
CDH23Q9H251 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CDH23Q9H251 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CDH23Q9H251 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC22.01■■□□□ 1.11
CDH23Q9H251 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.01■■□□□ 1.11
CDH23Q9H251 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.01■■□□□ 1.11
CDH23Q9H251 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDH23Q9H251 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDH23Q9H251 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDH23Q9H251 RBM17P1-201ENST00000453646 1190 ntBASIC22.01■■□□□ 1.11
CDH23Q9H251 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CDH23Q9H251 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.01■■□□□ 1.11
CDH23Q9H251 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CDH23Q9H251 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDH23Q9H251 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.01■■□□□ 1.11
CDH23Q9H251 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDH23Q9H251 DUSP5P1-201ENST00000441325 1139 ntBASIC22.01■■□□□ 1.11
CDH23Q9H251 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC22.01■■□□□ 1.11
CDH23Q9H251 AC010947.1-201ENST00000623454 693 ntBASIC22.01■■□□□ 1.11
CDH23Q9H251 KRT18P22-201ENST00000402024 1347 ntBASIC22■■□□□ 1.11
CDH23Q9H251 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22■■□□□ 1.11
CDH23Q9H251 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDH23Q9H251 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CDH23Q9H251 AP000525.1-201ENST00000608286 694 ntBASIC22■■□□□ 1.11
CDH23Q9H251 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDH23Q9H251 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22■■□□□ 1.11
CDH23Q9H251 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDH23Q9H251 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDH23Q9H251 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDH23Q9H251 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDH23Q9H251 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.99■■□□□ 1.11
CDH23Q9H251 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.99■■□□□ 1.11
CDH23Q9H251 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDH23Q9H251 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.99■■□□□ 1.11
CDH23Q9H251 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CDH23Q9H251 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDH23Q9H251 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.99■■□□□ 1.11
CDH23Q9H251 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.99■■□□□ 1.11
CDH23Q9H251 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CDH23Q9H251 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.99■■□□□ 1.11
CDH23Q9H251 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDH23Q9H251 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH23Q9H251 AL358472.4-201ENST00000633140 710 ntBASIC21.98■■□□□ 1.11
CDH23Q9H251 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH23Q9H251 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.98■■□□□ 1.11
CDH23Q9H251 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH23Q9H251 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH23Q9H251 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDH23Q9H251 AC009947.2-201ENST00000444014 672 ntBASIC21.98■■□□□ 1.11
CDH23Q9H251 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.98■■□□□ 1.11
CDH23Q9H251 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH23Q9H251 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CDH23Q9H251 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH23Q9H251 UNC93B2-201ENST00000285383 730 ntBASIC21.98■■□□□ 1.11
CDH23Q9H251 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH23Q9H251 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
CDH23Q9H251 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDH23Q9H251 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.97■■□□□ 1.11
CDH23Q9H251 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH23Q9H251 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH23Q9H251 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDH23Q9H251 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH23Q9H251 AC026396.1-201ENST00000419388 421 ntBASIC21.97■■□□□ 1.11
CDH23Q9H251 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.97■■□□□ 1.11
CDH23Q9H251 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.97■■□□□ 1.11
CDH23Q9H251 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.97■■□□□ 1.11
CDH23Q9H251 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH23Q9H251 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDH23Q9H251 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CDH23Q9H251 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.97■■□□□ 1.11
CDH23Q9H251 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.97■■□□□ 1.11
CDH23Q9H251 AC027702.1-201ENST00000563810 1770 ntBASIC21.97■■□□□ 1.11
CDH23Q9H251 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
CDH23Q9H251 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH23Q9H251 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
CDH23Q9H251 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDH23Q9H251 MYC-208ENST00000641036 567 ntBASIC21.96■■□□□ 1.11
CDH23Q9H251 AL390955.1-201ENST00000428694 934 ntBASIC21.96■■□□□ 1.11
CDH23Q9H251 SLC25A3P1-201ENST00000443844 931 ntBASIC21.96■■□□□ 1.11
CDH23Q9H251 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.96■■□□□ 1.11
CDH23Q9H251 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
CDH23Q9H251 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.96■■□□□ 1.11
CDH23Q9H251 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CDH23Q9H251 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.96■■□□□ 1.11
CDH23Q9H251 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms