Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RNF38Q9H0F5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF38Q9H0F5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF38Q9H0F5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF38Q9H0F5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.34■■□□□ 1.01
RNF38Q9H0F5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
RNF38Q9H0F5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF38Q9H0F5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RNF38Q9H0F5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF38Q9H0F5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RNF38Q9H0F5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF38Q9H0F5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF38Q9H0F5 AC087633.2-202ENST00000565166 1439 ntBASIC21.33■■□□□ 1.01
RNF38Q9H0F5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RNF38Q9H0F5 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.33■■□□□ 1.01
RNF38Q9H0F5 AC060766.5-201ENST00000590539 871 ntBASIC21.33■■□□□ 1.01
RNF38Q9H0F5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RNF38Q9H0F5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.33■■□□□ 1.01
RNF38Q9H0F5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF38Q9H0F5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF38Q9H0F5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.33■■□□□ 1
RNF38Q9H0F5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
RNF38Q9H0F5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF38Q9H0F5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RNF38Q9H0F5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RNF38Q9H0F5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
RNF38Q9H0F5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.32■■□□□ 1
RNF38Q9H0F5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
RNF38Q9H0F5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF38Q9H0F5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.32■■□□□ 1
RNF38Q9H0F5 AC008403.3-201ENST00000598924 454 ntBASIC21.32■■□□□ 1
RNF38Q9H0F5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.32■■□□□ 1
RNF38Q9H0F5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF38Q9H0F5 AC006058.3-201ENST00000606217 1069 ntBASIC21.32■■□□□ 1
RNF38Q9H0F5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF38Q9H0F5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RNF38Q9H0F5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF38Q9H0F5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF38Q9H0F5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF38Q9H0F5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF38Q9H0F5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RNF38Q9H0F5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.32■■□□□ 1
RNF38Q9H0F5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
RNF38Q9H0F5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF38Q9H0F5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
RNF38Q9H0F5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF38Q9H0F5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF38Q9H0F5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF38Q9H0F5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF38Q9H0F5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF38Q9H0F5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF38Q9H0F5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF38Q9H0F5 AC026366.1-201ENST00000488803 879 ntBASIC21.31■■□□□ 1
RNF38Q9H0F5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF38Q9H0F5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF38Q9H0F5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.31■■□□□ 1
RNF38Q9H0F5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF38Q9H0F5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF38Q9H0F5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF38Q9H0F5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF38Q9H0F5 AC011484.1-201ENST00000377652 1995 ntBASIC21.3■■□□□ 1
RNF38Q9H0F5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF38Q9H0F5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF38Q9H0F5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.3■■□□□ 1
RNF38Q9H0F5 AP003097.1-201ENST00000530657 1135 ntBASIC21.3■■□□□ 1
RNF38Q9H0F5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF38Q9H0F5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF38Q9H0F5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF38Q9H0F5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RNF38Q9H0F5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF38Q9H0F5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF38Q9H0F5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.29■■□□□ 1
RNF38Q9H0F5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF38Q9H0F5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.29■■□□□ 1
RNF38Q9H0F5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RNF38Q9H0F5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF38Q9H0F5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF38Q9H0F5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF38Q9H0F5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF38Q9H0F5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.29■■□□□ 1
RNF38Q9H0F5 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.29■■□□□ 1
RNF38Q9H0F5 PNMA6B-201ENST00000538162 1200 ntBASIC21.29■■□□□ 1
RNF38Q9H0F5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RNF38Q9H0F5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.29■■□□□ 1
RNF38Q9H0F5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RNF38Q9H0F5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RNF38Q9H0F5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.29■■□□□ 1
RNF38Q9H0F5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF38Q9H0F5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF38Q9H0F5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF38Q9H0F5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF38Q9H0F5 AC092368.3-202ENST00000574180 1591 ntBASIC21.28■■□□□ 1
RNF38Q9H0F5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.28■■□□□ 1
RNF38Q9H0F5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF38Q9H0F5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RNF38Q9H0F5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF38Q9H0F5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RNF38Q9H0F5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.28■■□□□ 1
RNF38Q9H0F5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF38Q9H0F5 AC128676.1-201ENST00000454392 318 ntBASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms