Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM2Q9C040 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM2Q9C040 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.84■□□□□ 0.61
TRIM2Q9C040 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM2Q9C040 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM2Q9C040 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM2Q9C040 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM2Q9C040 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM2Q9C040 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM2Q9C040 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM2Q9C040 FP700111.2-201ENST00000619190 1892 ntBASIC18.84■□□□□ 0.61
TRIM2Q9C040 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM2Q9C040 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM2Q9C040 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM2Q9C040 AC004854.2-201ENST00000608450 1441 ntBASIC18.83■□□□□ 0.61
TRIM2Q9C040 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM2Q9C040 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM2Q9C040 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM2Q9C040 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.83■□□□□ 0.6
TRIM2Q9C040 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM2Q9C040 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM2Q9C040 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM2Q9C040 AL137784.2-201ENST00000607332 1000 ntBASIC18.83■□□□□ 0.6
TRIM2Q9C040 AC092437.1-201ENST00000624794 1048 ntBASIC18.83■□□□□ 0.6
TRIM2Q9C040 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM2Q9C040 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TRIM2Q9C040 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM2Q9C040 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM2Q9C040 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM2Q9C040 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
TRIM2Q9C040 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM2Q9C040 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM2Q9C040 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRIM2Q9C040 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM2Q9C040 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TRIM2Q9C040 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM2Q9C040 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM2Q9C040 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM2Q9C040 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM2Q9C040 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM2Q9C040 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM2Q9C040 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM2Q9C040 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM2Q9C040 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM2Q9C040 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM2Q9C040 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM2Q9C040 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM2Q9C040 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM2Q9C040 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM2Q9C040 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TRIM2Q9C040 KRT19P1-201ENST00000405746 1186 ntBASIC18.82■□□□□ 0.6
TRIM2Q9C040 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.82■□□□□ 0.6
TRIM2Q9C040 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM2Q9C040 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM2Q9C040 SLC7A5P1-201ENST00000568957 537 ntBASIC18.82■□□□□ 0.6
TRIM2Q9C040 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM2Q9C040 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRIM2Q9C040 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRIM2Q9C040 AC073314.1-201ENST00000568729 2216 ntBASIC18.82■□□□□ 0.6
TRIM2Q9C040 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM2Q9C040 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM2Q9C040 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM2Q9C040 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM2Q9C040 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM2Q9C040 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.81■□□□□ 0.6
TRIM2Q9C040 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM2Q9C040 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM2Q9C040 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM2Q9C040 AC116050.2-201ENST00000612102 1779 ntBASIC18.81■□□□□ 0.6
TRIM2Q9C040 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM2Q9C040 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.81■□□□□ 0.6
TRIM2Q9C040 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM2Q9C040 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM2Q9C040 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRIM2Q9C040 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM2Q9C040 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRIM2Q9C040 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM2Q9C040 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
TRIM2Q9C040 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRIM2Q9C040 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM2Q9C040 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM2Q9C040 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRIM2Q9C040 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM2Q9C040 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM2Q9C040 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM2Q9C040 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM2Q9C040 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRIM2Q9C040 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM2Q9C040 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM2Q9C040 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM2Q9C040 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM2Q9C040 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM2Q9C040 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM2Q9C040 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM2Q9C040 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRIM2Q9C040 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM2Q9C040 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM2Q9C040 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM2Q9C040 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM2Q9C040 AC027702.1-201ENST00000563810 1770 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms