Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
RPAP1Q9BWH6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RPAP1Q9BWH6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
RPAP1Q9BWH6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.97■■□□□ 1.59
RPAP1Q9BWH6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RPAP1Q9BWH6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC24.97■■□□□ 1.59
RPAP1Q9BWH6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC24.97■■□□□ 1.59
RPAP1Q9BWH6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC24.97■■□□□ 1.59
RPAP1Q9BWH6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC24.97■■□□□ 1.59
RPAP1Q9BWH6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.97■■□□□ 1.59
RPAP1Q9BWH6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC24.97■■□□□ 1.59
RPAP1Q9BWH6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.97■■□□□ 1.59
RPAP1Q9BWH6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
RPAP1Q9BWH6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
RPAP1Q9BWH6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RPAP1Q9BWH6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RPAP1Q9BWH6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC24.96■■□□□ 1.59
RPAP1Q9BWH6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RPAP1Q9BWH6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.96■■□□□ 1.59
RPAP1Q9BWH6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC24.96■■□□□ 1.59
RPAP1Q9BWH6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.95■■□□□ 1.59
RPAP1Q9BWH6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC24.95■■□□□ 1.59
RPAP1Q9BWH6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
RPAP1Q9BWH6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RPAP1Q9BWH6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
RPAP1Q9BWH6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RPAP1Q9BWH6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
RPAP1Q9BWH6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.94■■□□□ 1.58
RPAP1Q9BWH6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC24.94■■□□□ 1.58
RPAP1Q9BWH6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC24.94■■□□□ 1.58
RPAP1Q9BWH6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.94■■□□□ 1.58
RPAP1Q9BWH6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
RPAP1Q9BWH6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
RPAP1Q9BWH6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RPAP1Q9BWH6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.94■■□□□ 1.58
RPAP1Q9BWH6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC24.94■■□□□ 1.58
RPAP1Q9BWH6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.94■■□□□ 1.58
RPAP1Q9BWH6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
RPAP1Q9BWH6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RPAP1Q9BWH6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RPAP1Q9BWH6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC24.94■■□□□ 1.58
RPAP1Q9BWH6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.94■■□□□ 1.58
RPAP1Q9BWH6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RPAP1Q9BWH6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.94■■□□□ 1.58
RPAP1Q9BWH6 ESRRAP1-201ENST00000400596 1257 ntBASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 AC245052.3-201ENST00000450182 901 ntBASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 RPS2P52-201ENST00000469610 820 ntBASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 GCSHP5-201ENST00000443090 522 ntBASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 FAM21FP-204ENST00000608637 956 ntBASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC24.93■■□□□ 1.58
RPAP1Q9BWH6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RPAP1Q9BWH6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RPAP1Q9BWH6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
RPAP1Q9BWH6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RPAP1Q9BWH6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
RPAP1Q9BWH6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RPAP1Q9BWH6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RPAP1Q9BWH6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC24.92■■□□□ 1.58
RPAP1Q9BWH6 SERPINH1P1-201ENST00000419794 1249 ntBASIC24.92■■□□□ 1.58
RPAP1Q9BWH6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RPAP1Q9BWH6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC24.92■■□□□ 1.58
RPAP1Q9BWH6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC24.92■■□□□ 1.58
RPAP1Q9BWH6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RPAP1Q9BWH6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RPAP1Q9BWH6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.92■■□□□ 1.58
RPAP1Q9BWH6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
RPAP1Q9BWH6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RPAP1Q9BWH6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.91■■□□□ 1.58
RPAP1Q9BWH6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.91■■□□□ 1.58
RPAP1Q9BWH6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
RPAP1Q9BWH6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RPAP1Q9BWH6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC24.91■■□□□ 1.58
RPAP1Q9BWH6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RPAP1Q9BWH6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
RPAP1Q9BWH6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
RPAP1Q9BWH6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
RPAP1Q9BWH6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
RPAP1Q9BWH6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
RPAP1Q9BWH6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RPAP1Q9BWH6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RPAP1Q9BWH6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RPAP1Q9BWH6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms