Protein–RNA interactions for Protein: Q9BV87

CNPPD1, Protein CNPPD1, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNPPD1Q9BV87 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CNPPD1Q9BV87 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CNPPD1Q9BV87 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CNPPD1Q9BV87 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNPPD1Q9BV87 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNPPD1Q9BV87 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.43■□□□□ 0.7
CNPPD1Q9BV87 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.42■□□□□ 0.7
CNPPD1Q9BV87 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNPPD1Q9BV87 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CNPPD1Q9BV87 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNPPD1Q9BV87 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.42■□□□□ 0.7
CNPPD1Q9BV87 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNPPD1Q9BV87 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNPPD1Q9BV87 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNPPD1Q9BV87 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CNPPD1Q9BV87 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CNPPD1Q9BV87 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.42■□□□□ 0.7
CNPPD1Q9BV87 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNPPD1Q9BV87 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNPPD1Q9BV87 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CNPPD1Q9BV87 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNPPD1Q9BV87 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CNPPD1Q9BV87 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.41■□□□□ 0.7
CNPPD1Q9BV87 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNPPD1Q9BV87 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
CNPPD1Q9BV87 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.41■□□□□ 0.7
CNPPD1Q9BV87 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CNPPD1Q9BV87 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.41■□□□□ 0.7
CNPPD1Q9BV87 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CNPPD1Q9BV87 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.41■□□□□ 0.7
CNPPD1Q9BV87 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.41■□□□□ 0.7
CNPPD1Q9BV87 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNPPD1Q9BV87 RBM17P2-201ENST00000616397 1405 ntBASIC19.41■□□□□ 0.7
CNPPD1Q9BV87 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.4■□□□□ 0.7
CNPPD1Q9BV87 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.4■□□□□ 0.7
CNPPD1Q9BV87 AL049796.1-201ENST00000565336 1766 ntBASIC19.4■□□□□ 0.7
CNPPD1Q9BV87 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNPPD1Q9BV87 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNPPD1Q9BV87 TERF1P5-201ENST00000477545 1207 ntBASIC19.4■□□□□ 0.7
CNPPD1Q9BV87 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.4■□□□□ 0.7
CNPPD1Q9BV87 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.4■□□□□ 0.7
CNPPD1Q9BV87 AC080038.1-201ENST00000611274 1154 ntBASIC19.4■□□□□ 0.7
CNPPD1Q9BV87 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNPPD1Q9BV87 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNPPD1Q9BV87 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CNPPD1Q9BV87 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNPPD1Q9BV87 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNPPD1Q9BV87 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNPPD1Q9BV87 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNPPD1Q9BV87 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNPPD1Q9BV87 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CNPPD1Q9BV87 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNPPD1Q9BV87 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CNPPD1Q9BV87 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.39■□□□□ 0.69
CNPPD1Q9BV87 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.39■□□□□ 0.69
CNPPD1Q9BV87 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNPPD1Q9BV87 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.39■□□□□ 0.69
CNPPD1Q9BV87 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.39■□□□□ 0.69
CNPPD1Q9BV87 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.39■□□□□ 0.69
CNPPD1Q9BV87 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CNPPD1Q9BV87 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNPPD1Q9BV87 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNPPD1Q9BV87 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
CNPPD1Q9BV87 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNPPD1Q9BV87 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.39■□□□□ 0.69
CNPPD1Q9BV87 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNPPD1Q9BV87 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNPPD1Q9BV87 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNPPD1Q9BV87 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNPPD1Q9BV87 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CNPPD1Q9BV87 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNPPD1Q9BV87 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNPPD1Q9BV87 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNPPD1Q9BV87 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.38■□□□□ 0.69
CNPPD1Q9BV87 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.38■□□□□ 0.69
CNPPD1Q9BV87 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.38■□□□□ 0.69
CNPPD1Q9BV87 LINC01521-201ENST00000504184 1943 ntBASIC19.38■□□□□ 0.69
CNPPD1Q9BV87 DUX4L16-201ENST00000555130 1264 ntBASIC19.38■□□□□ 0.69
CNPPD1Q9BV87 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.38■□□□□ 0.69
CNPPD1Q9BV87 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.38■□□□□ 0.69
CNPPD1Q9BV87 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNPPD1Q9BV87 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
CNPPD1Q9BV87 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNPPD1Q9BV87 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CNPPD1Q9BV87 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNPPD1Q9BV87 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.37■□□□□ 0.69
CNPPD1Q9BV87 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.37■□□□□ 0.69
CNPPD1Q9BV87 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CNPPD1Q9BV87 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CNPPD1Q9BV87 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNPPD1Q9BV87 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNPPD1Q9BV87 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.37■□□□□ 0.69
CNPPD1Q9BV87 AC243732.1-201ENST00000612648 864 ntBASIC19.37■□□□□ 0.69
CNPPD1Q9BV87 AC013268.1-206ENST00000638368 961 ntBASIC19.37■□□□□ 0.69
CNPPD1Q9BV87 AC112229.1-201ENST00000639295 961 ntBASIC19.37■□□□□ 0.69
CNPPD1Q9BV87 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNPPD1Q9BV87 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNPPD1Q9BV87 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
CNPPD1Q9BV87 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNPPD1Q9BV87 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms