Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 AL020996.1-203ENST00000536896 2307 ntBASIC12.16□□□□□ -0.46
LIMD2Q9BT23 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIMD2Q9BT23 AL158211.5-201ENST00000623583 2518 ntBASIC12.15□□□□□ -0.46
LIMD2Q9BT23 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 ME2-206ENST00000638410 2289 ntTSL 5 BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 ME2-210ENST00000639255 2262 ntTSL 5 BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 LINC01521-201ENST00000504184 1943 ntBASIC12.15□□□□□ -0.46
LIMD2Q9BT23 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIMD2Q9BT23 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
LIMD2Q9BT23 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
LIMD2Q9BT23 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
LIMD2Q9BT23 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC12.15□□□□□ -0.47
LIMD2Q9BT23 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 IRS3P-201ENST00000223076 1006 ntBASIC12.14□□□□□ -0.47
LIMD2Q9BT23 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 NT5C3AP1-201ENST00000394500 1012 ntBASIC12.14□□□□□ -0.47
LIMD2Q9BT23 MTURN-203ENST00000409688 843 ntTSL 2 BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms