Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCGF1Q9BSM1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.15■□□□□ 0.34
PCGF1Q9BSM1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.15■□□□□ 0.34
PCGF1Q9BSM1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCGF1Q9BSM1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.15■□□□□ 0.34
PCGF1Q9BSM1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCGF1Q9BSM1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCGF1Q9BSM1 AIRN-201ENST00000601203 4374 ntBASIC17.15■□□□□ 0.34
PCGF1Q9BSM1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.15■□□□□ 0.34
PCGF1Q9BSM1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCGF1Q9BSM1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
PCGF1Q9BSM1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCGF1Q9BSM1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCGF1Q9BSM1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCGF1Q9BSM1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCGF1Q9BSM1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
PCGF1Q9BSM1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCGF1Q9BSM1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCGF1Q9BSM1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCGF1Q9BSM1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 CYP2T1P-201ENST00000432607 1285 ntBASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 AF201337.1-201ENST00000520239 748 ntBASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 AC105036.2-201ENST00000569468 176 ntBASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.14■□□□□ 0.33
PCGF1Q9BSM1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 AC068338.2-201ENST00000563278 1430 ntBASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 RBM17P2-201ENST00000616397 1405 ntBASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCGF1Q9BSM1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 AC245052.3-201ENST00000450182 901 ntBASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 AC007322.4-201ENST00000509611 723 ntBASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 AC069236.1-201ENST00000604339 616 ntBASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCGF1Q9BSM1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.11■□□□□ 0.33
PCGF1Q9BSM1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.11■□□□□ 0.33
PCGF1Q9BSM1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.11■□□□□ 0.33
PCGF1Q9BSM1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCGF1Q9BSM1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCGF1Q9BSM1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCGF1Q9BSM1 TSPY6P-201ENST00000448518 926 ntBASIC17.11■□□□□ 0.33
PCGF1Q9BSM1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms