Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.03■□□□□ 0.48
VRK1Q99986 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VRK1Q99986 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VRK1Q99986 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VRK1Q99986 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VRK1Q99986 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.02■□□□□ 0.48
VRK1Q99986 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VRK1Q99986 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.02■□□□□ 0.48
VRK1Q99986 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VRK1Q99986 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
VRK1Q99986 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VRK1Q99986 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VRK1Q99986 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.02■□□□□ 0.48
VRK1Q99986 DUX4L16-201ENST00000555130 1264 ntBASIC18.02■□□□□ 0.48
VRK1Q99986 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
VRK1Q99986 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
VRK1Q99986 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
VRK1Q99986 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VRK1Q99986 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.02■□□□□ 0.47
VRK1Q99986 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
VRK1Q99986 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
VRK1Q99986 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VRK1Q99986 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.01■□□□□ 0.47
VRK1Q99986 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VRK1Q99986 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VRK1Q99986 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VRK1Q99986 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VRK1Q99986 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VRK1Q99986 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.01■□□□□ 0.47
VRK1Q99986 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.01■□□□□ 0.47
VRK1Q99986 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.01■□□□□ 0.47
VRK1Q99986 AL355802.2-201ENST00000402069 882 ntBASIC18.01■□□□□ 0.47
VRK1Q99986 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.01■□□□□ 0.47
VRK1Q99986 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.01■□□□□ 0.47
VRK1Q99986 SLC7A5P2-201ENST00000553010 536 ntBASIC18.01■□□□□ 0.47
VRK1Q99986 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.01■□□□□ 0.47
VRK1Q99986 AC005181.1-201ENST00000604782 1256 ntBASIC18.01■□□□□ 0.47
VRK1Q99986 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.01■□□□□ 0.47
VRK1Q99986 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
VRK1Q99986 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
VRK1Q99986 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
VRK1Q99986 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
VRK1Q99986 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VRK1Q99986 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VRK1Q99986 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18■□□□□ 0.47
VRK1Q99986 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VRK1Q99986 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
VRK1Q99986 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VRK1Q99986 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VRK1Q99986 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18■□□□□ 0.47
VRK1Q99986 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18■□□□□ 0.47
VRK1Q99986 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
VRK1Q99986 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18■□□□□ 0.47
VRK1Q99986 GPX1P1-201ENST00000388829 606 ntBASIC18■□□□□ 0.47
VRK1Q99986 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18■□□□□ 0.47
VRK1Q99986 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18■□□□□ 0.47
VRK1Q99986 AC104771.1-201ENST00000603335 964 ntBASIC18■□□□□ 0.47
VRK1Q99986 AC010536.3-201ENST00000620306 533 ntBASIC18■□□□□ 0.47
VRK1Q99986 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18■□□□□ 0.47
VRK1Q99986 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18■□□□□ 0.47
VRK1Q99986 AIRN-201ENST00000601203 4374 ntBASIC18■□□□□ 0.47
VRK1Q99986 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18■□□□□ 0.47
VRK1Q99986 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
VRK1Q99986 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18■□□□□ 0.47
VRK1Q99986 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VRK1Q99986 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
VRK1Q99986 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
VRK1Q99986 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VRK1Q99986 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
VRK1Q99986 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VRK1Q99986 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.99■□□□□ 0.47
VRK1Q99986 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VRK1Q99986 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VRK1Q99986 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
VRK1Q99986 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VRK1Q99986 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.99■□□□□ 0.47
VRK1Q99986 NCF1B-203ENST00000435988 1254 ntBASIC17.99■□□□□ 0.47
VRK1Q99986 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VRK1Q99986 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.99■□□□□ 0.47
VRK1Q99986 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.99■□□□□ 0.47
VRK1Q99986 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.99■□□□□ 0.47
VRK1Q99986 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VRK1Q99986 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
VRK1Q99986 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
VRK1Q99986 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
VRK1Q99986 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VRK1Q99986 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.99■□□□□ 0.47
VRK1Q99986 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
VRK1Q99986 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.98■□□□□ 0.47
VRK1Q99986 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VRK1Q99986 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VRK1Q99986 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VRK1Q99986 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
VRK1Q99986 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.98■□□□□ 0.47
VRK1Q99986 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.98■□□□□ 0.47
VRK1Q99986 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
VRK1Q99986 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.98■□□□□ 0.47
VRK1Q99986 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
VRK1Q99986 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VRK1Q99986 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms