Protein–RNA interactions for Protein: Q99941

ATF6B, Cyclic AMP-dependent transcription factor ATF-6 beta, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF6BQ99941 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF6BQ99941 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF6BQ99941 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF6BQ99941 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF6BQ99941 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.35■□□□□ 0.53
ATF6BQ99941 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.35■□□□□ 0.53
ATF6BQ99941 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.35■□□□□ 0.53
ATF6BQ99941 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF6BQ99941 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF6BQ99941 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.35■□□□□ 0.53
ATF6BQ99941 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF6BQ99941 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF6BQ99941 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATF6BQ99941 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF6BQ99941 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATF6BQ99941 EEF1DP3-203ENST00000566025 782 ntBASIC18.35■□□□□ 0.53
ATF6BQ99941 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.35■□□□□ 0.53
ATF6BQ99941 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ATF6BQ99941 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.35■□□□□ 0.53
ATF6BQ99941 AC053503.5-201ENST00000601508 636 ntBASIC18.35■□□□□ 0.53
ATF6BQ99941 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF6BQ99941 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF6BQ99941 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF6BQ99941 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF6BQ99941 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATF6BQ99941 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATF6BQ99941 AC079140.4-201ENST00000507448 529 ntBASIC18.34■□□□□ 0.53
ATF6BQ99941 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
ATF6BQ99941 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.34■□□□□ 0.53
ATF6BQ99941 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.34■□□□□ 0.53
ATF6BQ99941 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.34■□□□□ 0.53
ATF6BQ99941 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.34■□□□□ 0.53
ATF6BQ99941 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATF6BQ99941 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
ATF6BQ99941 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
ATF6BQ99941 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ATF6BQ99941 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ATF6BQ99941 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ATF6BQ99941 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATF6BQ99941 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.33■□□□□ 0.52
ATF6BQ99941 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATF6BQ99941 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATF6BQ99941 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.33■□□□□ 0.52
ATF6BQ99941 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.33■□□□□ 0.52
ATF6BQ99941 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.33■□□□□ 0.52
ATF6BQ99941 AC112907.3-201ENST00000577781 2400 ntBASIC18.33■□□□□ 0.52
ATF6BQ99941 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATF6BQ99941 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATF6BQ99941 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATF6BQ99941 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATF6BQ99941 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ATF6BQ99941 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ATF6BQ99941 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATF6BQ99941 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.32■□□□□ 0.52
ATF6BQ99941 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATF6BQ99941 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATF6BQ99941 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.32■□□□□ 0.52
ATF6BQ99941 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
ATF6BQ99941 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATF6BQ99941 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATF6BQ99941 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATF6BQ99941 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATF6BQ99941 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.32■□□□□ 0.52
ATF6BQ99941 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ATF6BQ99941 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ATF6BQ99941 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
ATF6BQ99941 KRT87P-202ENST00000534226 1464 ntBASIC18.32■□□□□ 0.52
ATF6BQ99941 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ATF6BQ99941 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.32■□□□□ 0.52
ATF6BQ99941 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ATF6BQ99941 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATF6BQ99941 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATF6BQ99941 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATF6BQ99941 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATF6BQ99941 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ATF6BQ99941 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATF6BQ99941 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATF6BQ99941 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATF6BQ99941 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.31■□□□□ 0.52
ATF6BQ99941 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.31■□□□□ 0.52
ATF6BQ99941 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATF6BQ99941 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ATF6BQ99941 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.31■□□□□ 0.52
ATF6BQ99941 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATF6BQ99941 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.31■□□□□ 0.52
ATF6BQ99941 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATF6BQ99941 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
ATF6BQ99941 LINC02228-203ENST00000641970 1355 ntBASIC18.3■□□□□ 0.52
ATF6BQ99941 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATF6BQ99941 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ATF6BQ99941 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
ATF6BQ99941 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATF6BQ99941 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATF6BQ99941 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.3■□□□□ 0.52
ATF6BQ99941 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATF6BQ99941 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.3■□□□□ 0.52
ATF6BQ99941 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ATF6BQ99941 SMG8-203ENST00000578922 2178 ntBASIC18.3■□□□□ 0.52
ATF6BQ99941 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.3■□□□□ 0.52
ATF6BQ99941 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms