Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.6■■□□□ 1.05
SMOQ99835 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.6■■□□□ 1.05
SMOQ99835 AC083880.1-201ENST00000608266 535 ntBASIC21.6■■□□□ 1.05
SMOQ99835 AL589743.5-201ENST00000616611 1050 ntBASIC21.6■■□□□ 1.05
SMOQ99835 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SMOQ99835 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMOQ99835 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SMOQ99835 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMOQ99835 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.59■■□□□ 1.05
SMOQ99835 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMOQ99835 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMOQ99835 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SMOQ99835 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SMOQ99835 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.59■■□□□ 1.05
SMOQ99835 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SMOQ99835 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.59■■□□□ 1.05
SMOQ99835 AC105020.6-201ENST00000621523 1217 ntBASIC21.59■■□□□ 1.05
SMOQ99835 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMOQ99835 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMOQ99835 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.59■■□□□ 1.05
SMOQ99835 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SMOQ99835 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.58■■□□□ 1.05
SMOQ99835 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SMOQ99835 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.58■■□□□ 1.05
SMOQ99835 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMOQ99835 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMOQ99835 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMOQ99835 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.58■■□□□ 1.05
SMOQ99835 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.58■■□□□ 1.05
SMOQ99835 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.58■■□□□ 1.05
SMOQ99835 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SMOQ99835 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.58■■□□□ 1.05
SMOQ99835 KRT18P6-201ENST00000555540 1265 ntBASIC21.58■■□□□ 1.05
SMOQ99835 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMOQ99835 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.58■■□□□ 1.05
SMOQ99835 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.58■■□□□ 1.05
SMOQ99835 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SMOQ99835 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SMOQ99835 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
SMOQ99835 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
SMOQ99835 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
SMOQ99835 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
SMOQ99835 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMOQ99835 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMOQ99835 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMOQ99835 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SMOQ99835 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.57■■□□□ 1.04
SMOQ99835 AC097658.1-201ENST00000475555 843 ntBASIC21.57■■□□□ 1.04
SMOQ99835 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.57■■□□□ 1.04
SMOQ99835 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.57■■□□□ 1.04
SMOQ99835 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.57■■□□□ 1.04
SMOQ99835 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SMOQ99835 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.57■■□□□ 1.04
SMOQ99835 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SMOQ99835 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMOQ99835 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMOQ99835 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMOQ99835 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SMOQ99835 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMOQ99835 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SMOQ99835 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMOQ99835 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMOQ99835 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.56■■□□□ 1.04
SMOQ99835 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.56■■□□□ 1.04
SMOQ99835 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.56■■□□□ 1.04
SMOQ99835 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.56■■□□□ 1.04
SMOQ99835 AL356652.1-201ENST00000615962 565 ntBASIC21.56■■□□□ 1.04
SMOQ99835 MIR2861-201ENST00000636310 90 ntBASIC21.56■■□□□ 1.04
SMOQ99835 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMOQ99835 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMOQ99835 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SMOQ99835 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SMOQ99835 AL137060.1-201ENST00000618151 2648 ntBASIC21.56■■□□□ 1.04
SMOQ99835 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.55■■□□□ 1.04
SMOQ99835 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SMOQ99835 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMOQ99835 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMOQ99835 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SMOQ99835 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.55■■□□□ 1.04
SMOQ99835 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.55■■□□□ 1.04
SMOQ99835 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.55■■□□□ 1.04
SMOQ99835 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SMOQ99835 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMOQ99835 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMOQ99835 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMOQ99835 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.54■■□□□ 1.04
SMOQ99835 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMOQ99835 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMOQ99835 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.54■■□□□ 1.04
SMOQ99835 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMOQ99835 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMOQ99835 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMOQ99835 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SMOQ99835 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMOQ99835 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMOQ99835 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMOQ99835 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMOQ99835 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SMOQ99835 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMOQ99835 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms