Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.51■□□□□ 0.87
CPNE1Q99829 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.51■□□□□ 0.87
CPNE1Q99829 AC005837.3-201ENST00000612163 286 ntBASIC20.51■□□□□ 0.87
CPNE1Q99829 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
CPNE1Q99829 DUX4L6-201ENST00000626483 1275 ntBASIC20.51■□□□□ 0.87
CPNE1Q99829 DUX4L1-201ENST00000627662 1275 ntBASIC20.51■□□□□ 0.87
CPNE1Q99829 DUX4L8-201ENST00000629013 1275 ntBASIC20.51■□□□□ 0.87
CPNE1Q99829 DUX4L3-201ENST00000630187 1275 ntBASIC20.51■□□□□ 0.87
CPNE1Q99829 DUX4L7-201ENST00000630678 1275 ntBASIC20.51■□□□□ 0.87
CPNE1Q99829 DUX4L5-201ENST00000630834 1275 ntBASIC20.51■□□□□ 0.87
CPNE1Q99829 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE1Q99829 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE1Q99829 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE1Q99829 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.51■□□□□ 0.87
CPNE1Q99829 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE1Q99829 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CPNE1Q99829 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE1Q99829 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE1Q99829 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CPNE1Q99829 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE1Q99829 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CPNE1Q99829 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE1Q99829 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE1Q99829 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE1Q99829 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE1Q99829 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE1Q99829 AC116050.2-201ENST00000612102 1779 ntBASIC20.5■□□□□ 0.87
CPNE1Q99829 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE1Q99829 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE1Q99829 AC099778.1-201ENST00000568593 1911 ntBASIC20.5■□□□□ 0.87
CPNE1Q99829 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE1Q99829 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE1Q99829 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE1Q99829 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE1Q99829 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.5■□□□□ 0.87
CPNE1Q99829 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CPNE1Q99829 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE1Q99829 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CPNE1Q99829 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CPNE1Q99829 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE1Q99829 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE1Q99829 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE1Q99829 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE1Q99829 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE1Q99829 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE1Q99829 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE1Q99829 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE1Q99829 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE1Q99829 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.49■□□□□ 0.87
CPNE1Q99829 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.49■□□□□ 0.87
CPNE1Q99829 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE1Q99829 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CPNE1Q99829 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.49■□□□□ 0.87
CPNE1Q99829 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE1Q99829 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE1Q99829 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE1Q99829 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.48■□□□□ 0.87
CPNE1Q99829 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
CPNE1Q99829 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE1Q99829 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE1Q99829 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE1Q99829 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE1Q99829 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.48■□□□□ 0.87
CPNE1Q99829 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE1Q99829 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CPNE1Q99829 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE1Q99829 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.48■□□□□ 0.87
CPNE1Q99829 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
CPNE1Q99829 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE1Q99829 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.48■□□□□ 0.87
CPNE1Q99829 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE1Q99829 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE1Q99829 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CPNE1Q99829 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.47■□□□□ 0.87
CPNE1Q99829 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.47■□□□□ 0.87
CPNE1Q99829 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE1Q99829 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE1Q99829 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE1Q99829 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE1Q99829 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.47■□□□□ 0.87
CPNE1Q99829 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.47■□□□□ 0.87
CPNE1Q99829 AP001160.3-201ENST00000601484 763 ntBASIC20.47■□□□□ 0.87
CPNE1Q99829 AC104187.1-201ENST00000607510 612 ntBASIC20.47■□□□□ 0.87
CPNE1Q99829 MIR2861-201ENST00000636310 90 ntBASIC20.47■□□□□ 0.87
CPNE1Q99829 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE1Q99829 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.47■□□□□ 0.87
CPNE1Q99829 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.47■□□□□ 0.87
CPNE1Q99829 PCDHAC2-203ENST00000615316 3011 ntBASIC20.47■□□□□ 0.87
CPNE1Q99829 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CPNE1Q99829 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE1Q99829 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.46■□□□□ 0.87
CPNE1Q99829 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.46■□□□□ 0.87
CPNE1Q99829 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.46■□□□□ 0.87
CPNE1Q99829 SLC7A5P2-201ENST00000553010 536 ntBASIC20.46■□□□□ 0.87
CPNE1Q99829 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE1Q99829 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE1Q99829 AC112907.3-201ENST00000577781 2400 ntBASIC20.46■□□□□ 0.87
CPNE1Q99829 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE1Q99829 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.46■□□□□ 0.87
CPNE1Q99829 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms