Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SLC38A3Q99624 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SLC38A3Q99624 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A3Q99624 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SLC38A3Q99624 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC38A3Q99624 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SLC38A3Q99624 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC38A3Q99624 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC38A3Q99624 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A3Q99624 AC105020.6-201ENST00000621523 1217 ntBASIC19.9■□□□□ 0.78
SLC38A3Q99624 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SLC38A3Q99624 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A3Q99624 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SLC38A3Q99624 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A3Q99624 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A3Q99624 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A3Q99624 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A3Q99624 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.9■□□□□ 0.78
SLC38A3Q99624 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A3Q99624 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A3Q99624 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A3Q99624 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC38A3Q99624 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC38A3Q99624 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC38A3Q99624 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.89■□□□□ 0.77
SLC38A3Q99624 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.89■□□□□ 0.77
SLC38A3Q99624 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC38A3Q99624 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.89■□□□□ 0.77
SLC38A3Q99624 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.89■□□□□ 0.77
SLC38A3Q99624 UNC93B5-201ENST00000530315 699 ntBASIC19.89■□□□□ 0.77
SLC38A3Q99624 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC38A3Q99624 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.89■□□□□ 0.77
SLC38A3Q99624 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC38A3Q99624 AC060766.5-201ENST00000590539 871 ntBASIC19.89■□□□□ 0.77
SLC38A3Q99624 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SLC38A3Q99624 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.89■□□□□ 0.77
SLC38A3Q99624 EP400NL-214ENST00000641289 2402 ntBASIC19.89■□□□□ 0.77
SLC38A3Q99624 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC38A3Q99624 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC38A3Q99624 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC38A3Q99624 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC38A3Q99624 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC38A3Q99624 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC38A3Q99624 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SLC38A3Q99624 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC38A3Q99624 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SLC38A3Q99624 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.88■□□□□ 0.77
SLC38A3Q99624 PGM5P4-201ENST00000421970 445 ntBASIC19.88■□□□□ 0.77
SLC38A3Q99624 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC38A3Q99624 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC38A3Q99624 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC38A3Q99624 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC38A3Q99624 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.88■□□□□ 0.77
SLC38A3Q99624 HLA-B-256ENST00000639848 1089 ntBASIC19.88■□□□□ 0.77
SLC38A3Q99624 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC38A3Q99624 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SLC38A3Q99624 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.88■□□□□ 0.77
SLC38A3Q99624 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.87■□□□□ 0.77
SLC38A3Q99624 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SLC38A3Q99624 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SLC38A3Q99624 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC38A3Q99624 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC38A3Q99624 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC38A3Q99624 AC026366.1-201ENST00000488803 879 ntBASIC19.87■□□□□ 0.77
SLC38A3Q99624 AC008687.6-201ENST00000596318 630 ntBASIC19.87■□□□□ 0.77
SLC38A3Q99624 AC006058.3-201ENST00000606217 1069 ntBASIC19.87■□□□□ 0.77
SLC38A3Q99624 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC38A3Q99624 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
SLC38A3Q99624 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC38A3Q99624 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.87■□□□□ 0.77
SLC38A3Q99624 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC38A3Q99624 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.87■□□□□ 0.77
SLC38A3Q99624 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC38A3Q99624 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC38A3Q99624 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC38A3Q99624 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
SLC38A3Q99624 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC38A3Q99624 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC38A3Q99624 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC38A3Q99624 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC38A3Q99624 AC087633.2-202ENST00000565166 1439 ntBASIC19.86■□□□□ 0.77
SLC38A3Q99624 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
SLC38A3Q99624 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC38A3Q99624 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.86■□□□□ 0.77
SLC38A3Q99624 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC38A3Q99624 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC38A3Q99624 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC38A3Q99624 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC38A3Q99624 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC38A3Q99624 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
SLC38A3Q99624 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SLC38A3Q99624 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC38A3Q99624 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC38A3Q99624 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC38A3Q99624 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SLC38A3Q99624 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC38A3Q99624 AP003097.1-201ENST00000530657 1135 ntBASIC19.86■□□□□ 0.77
SLC38A3Q99624 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC38A3Q99624 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC38A3Q99624 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms