Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PKP4Q99569 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.98■□□□□ 0.79
PKP4Q99569 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PKP4Q99569 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PKP4Q99569 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PKP4Q99569 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.98■□□□□ 0.79
PKP4Q99569 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PKP4Q99569 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PKP4Q99569 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.97■□□□□ 0.79
PKP4Q99569 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.97■□□□□ 0.79
PKP4Q99569 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.97■□□□□ 0.79
PKP4Q99569 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PKP4Q99569 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PKP4Q99569 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PKP4Q99569 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.97■□□□□ 0.79
PKP4Q99569 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PKP4Q99569 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PKP4Q99569 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PKP4Q99569 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PKP4Q99569 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.97■□□□□ 0.79
PKP4Q99569 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.97■□□□□ 0.79
PKP4Q99569 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.97■□□□□ 0.79
PKP4Q99569 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PKP4Q99569 FAM21FP-204ENST00000608637 956 ntBASIC19.97■□□□□ 0.79
PKP4Q99569 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PKP4Q99569 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
PKP4Q99569 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.97■□□□□ 0.79
PKP4Q99569 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PKP4Q99569 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PKP4Q99569 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.97■□□□□ 0.79
PKP4Q99569 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
PKP4Q99569 AC007225.1-201ENST00000566331 1836 ntBASIC19.97■□□□□ 0.79
PKP4Q99569 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PKP4Q99569 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PKP4Q99569 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.96■□□□□ 0.79
PKP4Q99569 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PKP4Q99569 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.96■□□□□ 0.79
PKP4Q99569 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PKP4Q99569 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.96■□□□□ 0.79
PKP4Q99569 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.96■□□□□ 0.79
PKP4Q99569 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.96■□□□□ 0.79
PKP4Q99569 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PKP4Q99569 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PKP4Q99569 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PKP4Q99569 FP700111.2-201ENST00000619190 1892 ntBASIC19.96■□□□□ 0.79
PKP4Q99569 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PKP4Q99569 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PKP4Q99569 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PKP4Q99569 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PKP4Q99569 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PKP4Q99569 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PKP4Q99569 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PKP4Q99569 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PKP4Q99569 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PKP4Q99569 CYP2T1P-201ENST00000432607 1285 ntBASIC19.95■□□□□ 0.78
PKP4Q99569 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.95■□□□□ 0.78
PKP4Q99569 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PKP4Q99569 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.95■□□□□ 0.78
PKP4Q99569 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.95■□□□□ 0.78
PKP4Q99569 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.95■□□□□ 0.78
PKP4Q99569 RAP2CP1-201ENST00000605103 478 ntBASIC19.95■□□□□ 0.78
PKP4Q99569 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PKP4Q99569 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PKP4Q99569 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.95■□□□□ 0.78
PKP4Q99569 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PKP4Q99569 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PKP4Q99569 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PKP4Q99569 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PKP4Q99569 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PKP4Q99569 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PKP4Q99569 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PKP4Q99569 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PKP4Q99569 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PKP4Q99569 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PKP4Q99569 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.94■□□□□ 0.78
PKP4Q99569 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PKP4Q99569 RARRES2P4-201ENST00000514074 484 ntBASIC19.94■□□□□ 0.78
PKP4Q99569 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.94■□□□□ 0.78
PKP4Q99569 AC005181.1-201ENST00000604782 1256 ntBASIC19.94■□□□□ 0.78
PKP4Q99569 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PKP4Q99569 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
PKP4Q99569 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PKP4Q99569 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PKP4Q99569 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PKP4Q99569 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PKP4Q99569 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PKP4Q99569 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.94■□□□□ 0.78
PKP4Q99569 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PKP4Q99569 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PKP4Q99569 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.93■□□□□ 0.78
PKP4Q99569 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PKP4Q99569 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PKP4Q99569 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PKP4Q99569 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PKP4Q99569 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PKP4Q99569 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PKP4Q99569 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PKP4Q99569 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PKP4Q99569 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.93■□□□□ 0.78
PKP4Q99569 AC026185.1-201ENST00000445748 174 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms