Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.83■■□□□ 1.08
TWNKQ96RR1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.83■■□□□ 1.08
TWNKQ96RR1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TWNKQ96RR1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TWNKQ96RR1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TWNKQ96RR1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.82■■□□□ 1.08
TWNKQ96RR1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.82■■□□□ 1.08
TWNKQ96RR1 AL121603.2-201ENST00000557373 2117 ntBASIC21.82■■□□□ 1.08
TWNKQ96RR1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TWNKQ96RR1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TWNKQ96RR1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TWNKQ96RR1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.82■■□□□ 1.08
TWNKQ96RR1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TWNKQ96RR1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TWNKQ96RR1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.82■■□□□ 1.08
TWNKQ96RR1 AC100791.3-201ENST00000617619 330 ntBASIC21.82■■□□□ 1.08
TWNKQ96RR1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TWNKQ96RR1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
TWNKQ96RR1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TWNKQ96RR1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TWNKQ96RR1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TWNKQ96RR1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TWNKQ96RR1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
TWNKQ96RR1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.81■■□□□ 1.08
TWNKQ96RR1 KRT17P1-201ENST00000399211 1546 ntBASIC21.81■■□□□ 1.08
TWNKQ96RR1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TWNKQ96RR1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TWNKQ96RR1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.81■■□□□ 1.08
TWNKQ96RR1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
TWNKQ96RR1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.81■■□□□ 1.08
TWNKQ96RR1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.81■■□□□ 1.08
TWNKQ96RR1 AL138781.1-201ENST00000566567 1274 ntBASIC21.81■■□□□ 1.08
TWNKQ96RR1 CYP2T3P-201ENST00000601990 817 ntBASIC21.81■■□□□ 1.08
TWNKQ96RR1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
TWNKQ96RR1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TWNKQ96RR1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
TWNKQ96RR1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.81■■□□□ 1.08
TWNKQ96RR1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.81■■□□□ 1.08
TWNKQ96RR1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TWNKQ96RR1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TWNKQ96RR1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.8■■□□□ 1.08
TWNKQ96RR1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
TWNKQ96RR1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TWNKQ96RR1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.8■■□□□ 1.08
TWNKQ96RR1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TWNKQ96RR1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TWNKQ96RR1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TWNKQ96RR1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TWNKQ96RR1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TWNKQ96RR1 MCRIP2P1-201ENST00000394346 511 ntBASIC21.8■■□□□ 1.08
TWNKQ96RR1 MIPEPP3-201ENST00000412105 444 ntBASIC21.8■■□□□ 1.08
TWNKQ96RR1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.8■■□□□ 1.08
TWNKQ96RR1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.8■■□□□ 1.08
TWNKQ96RR1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.8■■□□□ 1.08
TWNKQ96RR1 MIR2861-201ENST00000636310 90 ntBASIC21.8■■□□□ 1.08
TWNKQ96RR1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
TWNKQ96RR1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.8■■□□□ 1.08
TWNKQ96RR1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TWNKQ96RR1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TWNKQ96RR1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TWNKQ96RR1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TWNKQ96RR1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TWNKQ96RR1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TWNKQ96RR1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.8■■□□□ 1.08
TWNKQ96RR1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TWNKQ96RR1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TWNKQ96RR1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TWNKQ96RR1 FP700111.2-201ENST00000619190 1892 ntBASIC21.79■■□□□ 1.08
TWNKQ96RR1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TWNKQ96RR1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TWNKQ96RR1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TWNKQ96RR1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TWNKQ96RR1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TWNKQ96RR1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TWNKQ96RR1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TWNKQ96RR1 AC098934.4-201ENST00000564127 592 ntBASIC21.79■■□□□ 1.08
TWNKQ96RR1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
TWNKQ96RR1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TWNKQ96RR1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
TWNKQ96RR1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.79■■□□□ 1.08
TWNKQ96RR1 AC087633.2-202ENST00000565166 1439 ntBASIC21.79■■□□□ 1.08
TWNKQ96RR1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TWNKQ96RR1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TWNKQ96RR1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.78■■□□□ 1.08
TWNKQ96RR1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TWNKQ96RR1 BX276092.2-201ENST00000417668 665 ntBASIC21.78■■□□□ 1.08
TWNKQ96RR1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.78■■□□□ 1.08
TWNKQ96RR1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.78■■□□□ 1.08
TWNKQ96RR1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.78■■□□□ 1.08
TWNKQ96RR1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TWNKQ96RR1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.78■■□□□ 1.08
TWNKQ96RR1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TWNKQ96RR1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.78■■□□□ 1.08
TWNKQ96RR1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.78■■□□□ 1.08
TWNKQ96RR1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TWNKQ96RR1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TWNKQ96RR1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.78■■□□□ 1.08
TWNKQ96RR1 AC007225.1-201ENST00000566331 1836 ntBASIC21.78■■□□□ 1.08
TWNKQ96RR1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TWNKQ96RR1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms