Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.2■□□□□ 0.98
PRICKLE1Q96MT3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.2■□□□□ 0.98
PRICKLE1Q96MT3 AC026310.3-201ENST00000625186 2373 ntBASIC21.2■□□□□ 0.98
PRICKLE1Q96MT3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRICKLE1Q96MT3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.2■□□□□ 0.98
PRICKLE1Q96MT3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.2■□□□□ 0.98
PRICKLE1Q96MT3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.2■□□□□ 0.98
PRICKLE1Q96MT3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
PRICKLE1Q96MT3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRICKLE1Q96MT3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
PRICKLE1Q96MT3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 MCRIP2P1-201ENST00000394346 511 ntBASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRICKLE1Q96MT3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 MYC-209ENST00000641252 345 ntBASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PRICKLE1Q96MT3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 AC083880.1-201ENST00000608266 535 ntBASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRICKLE1Q96MT3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRICKLE1Q96MT3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRICKLE1Q96MT3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRICKLE1Q96MT3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRICKLE1Q96MT3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PRICKLE1Q96MT3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRICKLE1Q96MT3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRICKLE1Q96MT3 DUSP5P2-201ENST00000426873 1033 ntBASIC21.16■□□□□ 0.98
PRICKLE1Q96MT3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.16■□□□□ 0.98
PRICKLE1Q96MT3 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.16■□□□□ 0.98
PRICKLE1Q96MT3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.16■□□□□ 0.98
PRICKLE1Q96MT3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.16■□□□□ 0.98
PRICKLE1Q96MT3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.16■□□□□ 0.98
PRICKLE1Q96MT3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.16■□□□□ 0.98
PRICKLE1Q96MT3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRICKLE1Q96MT3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRICKLE1Q96MT3 AC011484.1-201ENST00000377652 1995 ntBASIC21.16■□□□□ 0.98
PRICKLE1Q96MT3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRICKLE1Q96MT3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRICKLE1Q96MT3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.15■□□□□ 0.98
PRICKLE1Q96MT3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.15■□□□□ 0.98
PRICKLE1Q96MT3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.15■□□□□ 0.98
PRICKLE1Q96MT3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRICKLE1Q96MT3 LSM12P1-201ENST00000411836 588 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms