Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF560Q96MR9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
ZNF560Q96MR9 MYC-209ENST00000641252 345 ntBASIC21.99■■□□□ 1.11
ZNF560Q96MR9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF560Q96MR9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF560Q96MR9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
ZNF560Q96MR9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF560Q96MR9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.99■■□□□ 1.11
ZNF560Q96MR9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF560Q96MR9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZNF560Q96MR9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZNF560Q96MR9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ZNF560Q96MR9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZNF560Q96MR9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
ZNF560Q96MR9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.98■■□□□ 1.11
ZNF560Q96MR9 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.98■■□□□ 1.11
ZNF560Q96MR9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.98■■□□□ 1.11
ZNF560Q96MR9 KRT18P6-201ENST00000555540 1265 ntBASIC21.98■■□□□ 1.11
ZNF560Q96MR9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.98■■□□□ 1.11
ZNF560Q96MR9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
ZNF560Q96MR9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
ZNF560Q96MR9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZNF560Q96MR9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZNF560Q96MR9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZNF560Q96MR9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.97■■□□□ 1.11
ZNF560Q96MR9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 AF106564.1-201ENST00000607058 2553 ntBASIC21.97■■□□□ 1.11
ZNF560Q96MR9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF560Q96MR9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF560Q96MR9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.96■■□□□ 1.11
ZNF560Q96MR9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.96■■□□□ 1.11
ZNF560Q96MR9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF560Q96MR9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.96■■□□□ 1.11
ZNF560Q96MR9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF560Q96MR9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF560Q96MR9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF560Q96MR9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF560Q96MR9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.96■■□□□ 1.11
ZNF560Q96MR9 AL356652.1-201ENST00000615962 565 ntBASIC21.96■■□□□ 1.11
ZNF560Q96MR9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.96■■□□□ 1.11
ZNF560Q96MR9 AC027702.1-201ENST00000563810 1770 ntBASIC21.96■■□□□ 1.11
ZNF560Q96MR9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF560Q96MR9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF560Q96MR9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF560Q96MR9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF560Q96MR9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF560Q96MR9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF560Q96MR9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF560Q96MR9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.95■■□□□ 1.1
ZNF560Q96MR9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
ZNF560Q96MR9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF560Q96MR9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF560Q96MR9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.95■■□□□ 1.1
ZNF560Q96MR9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF560Q96MR9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF560Q96MR9 AC083880.1-201ENST00000608266 535 ntBASIC21.95■■□□□ 1.1
ZNF560Q96MR9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.95■■□□□ 1.1
ZNF560Q96MR9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF560Q96MR9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF560Q96MR9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF560Q96MR9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.95■■□□□ 1.1
ZNF560Q96MR9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF560Q96MR9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF560Q96MR9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.94■■□□□ 1.1
ZNF560Q96MR9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF560Q96MR9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF560Q96MR9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF560Q96MR9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
ZNF560Q96MR9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
ZNF560Q96MR9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF560Q96MR9 CD99P1-205ENST00000527459 561 ntBASIC21.94■■□□□ 1.1
ZNF560Q96MR9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.94■■□□□ 1.1
ZNF560Q96MR9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
ZNF560Q96MR9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF560Q96MR9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.94■■□□□ 1.1
ZNF560Q96MR9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF560Q96MR9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
ZNF560Q96MR9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF560Q96MR9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.94■■□□□ 1.1
ZNF560Q96MR9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF560Q96MR9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms