Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.51■□□□□ 0.71
ITCHQ96J02 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.51■□□□□ 0.71
ITCHQ96J02 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
ITCHQ96J02 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ITCHQ96J02 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ITCHQ96J02 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ITCHQ96J02 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.51■□□□□ 0.71
ITCHQ96J02 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.51■□□□□ 0.71
ITCHQ96J02 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ITCHQ96J02 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
ITCHQ96J02 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ITCHQ96J02 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ITCHQ96J02 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ITCHQ96J02 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ITCHQ96J02 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ITCHQ96J02 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ITCHQ96J02 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ITCHQ96J02 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ITCHQ96J02 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ITCHQ96J02 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ITCHQ96J02 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ITCHQ96J02 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.5■□□□□ 0.71
ITCHQ96J02 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ITCHQ96J02 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ITCHQ96J02 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.5■□□□□ 0.71
ITCHQ96J02 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ITCHQ96J02 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ITCHQ96J02 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ITCHQ96J02 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ITCHQ96J02 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ITCHQ96J02 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ITCHQ96J02 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ITCHQ96J02 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ITCHQ96J02 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.49■□□□□ 0.71
ITCHQ96J02 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ITCHQ96J02 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ITCHQ96J02 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ITCHQ96J02 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ITCHQ96J02 KRT87P-202ENST00000534226 1464 ntBASIC19.49■□□□□ 0.71
ITCHQ96J02 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ITCHQ96J02 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ITCHQ96J02 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.49■□□□□ 0.71
ITCHQ96J02 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.49■□□□□ 0.71
ITCHQ96J02 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.49■□□□□ 0.71
ITCHQ96J02 AC079140.4-201ENST00000507448 529 ntBASIC19.49■□□□□ 0.71
ITCHQ96J02 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ITCHQ96J02 AL031432.3-201ENST00000607698 485 ntBASIC19.49■□□□□ 0.71
ITCHQ96J02 AL358852.1-201ENST00000623174 1268 ntBASIC19.49■□□□□ 0.71
ITCHQ96J02 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ITCHQ96J02 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ITCHQ96J02 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ITCHQ96J02 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.49■□□□□ 0.71
ITCHQ96J02 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.49■□□□□ 0.71
ITCHQ96J02 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ITCHQ96J02 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ITCHQ96J02 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.49■□□□□ 0.71
ITCHQ96J02 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ITCHQ96J02 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.48■□□□□ 0.71
ITCHQ96J02 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ITCHQ96J02 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ITCHQ96J02 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ITCHQ96J02 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ITCHQ96J02 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ITCHQ96J02 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ITCHQ96J02 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.48■□□□□ 0.71
ITCHQ96J02 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.48■□□□□ 0.71
ITCHQ96J02 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.48■□□□□ 0.71
ITCHQ96J02 AFG3L1P-217ENST00000557444 2447 ntBASIC19.48■□□□□ 0.71
ITCHQ96J02 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ITCHQ96J02 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.48■□□□□ 0.71
ITCHQ96J02 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ITCHQ96J02 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ITCHQ96J02 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.48■□□□□ 0.71
ITCHQ96J02 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.48■□□□□ 0.71
ITCHQ96J02 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ITCHQ96J02 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.48■□□□□ 0.71
ITCHQ96J02 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.47■□□□□ 0.71
ITCHQ96J02 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ITCHQ96J02 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ITCHQ96J02 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.47■□□□□ 0.71
ITCHQ96J02 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ITCHQ96J02 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.47■□□□□ 0.71
ITCHQ96J02 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.47■□□□□ 0.71
ITCHQ96J02 AC092720.2-201ENST00000602388 1665 ntBASIC19.47■□□□□ 0.71
ITCHQ96J02 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
ITCHQ96J02 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.47■□□□□ 0.71
ITCHQ96J02 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.47■□□□□ 0.71
ITCHQ96J02 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ITCHQ96J02 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ITCHQ96J02 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ITCHQ96J02 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ITCHQ96J02 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ITCHQ96J02 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.47■□□□□ 0.71
ITCHQ96J02 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ITCHQ96J02 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ITCHQ96J02 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ITCHQ96J02 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ITCHQ96J02 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ITCHQ96J02 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ITCHQ96J02 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms