Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LRRC46Q96FV0 AC010980.2-201ENST00000587099 1412 ntBASIC18.4■□□□□ 0.54
LRRC46Q96FV0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC46Q96FV0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRRC46Q96FV0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC46Q96FV0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC46Q96FV0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
LRRC46Q96FV0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC46Q96FV0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC46Q96FV0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRRC46Q96FV0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC46Q96FV0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.38■□□□□ 0.53
LRRC46Q96FV0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRRC46Q96FV0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LRRC46Q96FV0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.38■□□□□ 0.53
LRRC46Q96FV0 AC091874.3-201ENST00000512672 1195 ntBASIC18.38■□□□□ 0.53
LRRC46Q96FV0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.38■□□□□ 0.53
LRRC46Q96FV0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC46Q96FV0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC46Q96FV0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC46Q96FV0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC46Q96FV0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC46Q96FV0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC46Q96FV0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC46Q96FV0 AF106564.1-201ENST00000607058 2553 ntBASIC18.37■□□□□ 0.53
LRRC46Q96FV0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC46Q96FV0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LRRC46Q96FV0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC46Q96FV0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC46Q96FV0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC46Q96FV0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC46Q96FV0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC46Q96FV0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms