Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.8■□□□□ 0.44
FOXRED1Q96CU9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.8■□□□□ 0.44
FOXRED1Q96CU9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXRED1Q96CU9 AP004607.4-201ENST00000530158 1459 ntBASIC17.8■□□□□ 0.44
FOXRED1Q96CU9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
FOXRED1Q96CU9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXRED1Q96CU9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXRED1Q96CU9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXRED1Q96CU9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXRED1Q96CU9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 AC053503.5-201ENST00000601508 636 ntBASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 AC105233.4-201ENST00000642045 216 ntBASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXRED1Q96CU9 AL512408.1-201ENST00000569378 2000 ntBASIC17.77■□□□□ 0.44
FOXRED1Q96CU9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXRED1Q96CU9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXRED1Q96CU9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXRED1Q96CU9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXRED1Q96CU9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXRED1Q96CU9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXRED1Q96CU9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXRED1Q96CU9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXRED1Q96CU9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXRED1Q96CU9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXRED1Q96CU9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXRED1Q96CU9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXRED1Q96CU9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXRED1Q96CU9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXRED1Q96CU9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXRED1Q96CU9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.77■□□□□ 0.43
FOXRED1Q96CU9 AL391422.3-201ENST00000603791 2761 ntBASIC17.77■□□□□ 0.43
FOXRED1Q96CU9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXRED1Q96CU9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXRED1Q96CU9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
FOXRED1Q96CU9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXRED1Q96CU9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXRED1Q96CU9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXRED1Q96CU9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXRED1Q96CU9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXRED1Q96CU9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXRED1Q96CU9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXRED1Q96CU9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXRED1Q96CU9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXRED1Q96CU9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms