Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 CROCCP5-201ENST00000436658 830 ntBASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 AL050303.2-201ENST00000619798 666 ntBASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 KRT8P36-201ENST00000489121 1440 ntBASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 AC087633.2-202ENST00000565166 1439 ntBASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CTHRC1Q96CG8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 MCRIP2P1-201ENST00000394346 511 ntBASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 AC008694.1-202ENST00000636953 945 ntBASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTHRC1Q96CG8 AP005212.1-201ENST00000581547 1997 ntBASIC19.04■□□□□ 0.64
CTHRC1Q96CG8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTHRC1Q96CG8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTHRC1Q96CG8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTHRC1Q96CG8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.04■□□□□ 0.64
CTHRC1Q96CG8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
CTHRC1Q96CG8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTHRC1Q96CG8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.04■□□□□ 0.64
CTHRC1Q96CG8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.04■□□□□ 0.64
CTHRC1Q96CG8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.04■□□□□ 0.64
CTHRC1Q96CG8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTHRC1Q96CG8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTHRC1Q96CG8 AC073314.1-201ENST00000568729 2216 ntBASIC19.04■□□□□ 0.64
CTHRC1Q96CG8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 AC010980.2-201ENST00000587099 1412 ntBASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 MIR663A-201ENST00000385250 93 ntBASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTHRC1Q96CG8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTHRC1Q96CG8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms