Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.18■□□□□ 0.5
APH1AQ96BI3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APH1AQ96BI3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APH1AQ96BI3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
APH1AQ96BI3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.18■□□□□ 0.5
APH1AQ96BI3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APH1AQ96BI3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APH1AQ96BI3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
APH1AQ96BI3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
APH1AQ96BI3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.17■□□□□ 0.5
APH1AQ96BI3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APH1AQ96BI3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APH1AQ96BI3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APH1AQ96BI3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
APH1AQ96BI3 MCRIP2P1-201ENST00000394346 511 ntBASIC18.17■□□□□ 0.5
APH1AQ96BI3 AL355802.2-201ENST00000402069 882 ntBASIC18.17■□□□□ 0.5
APH1AQ96BI3 GUSBP6-202ENST00000438529 1198 ntBASIC18.17■□□□□ 0.5
APH1AQ96BI3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.17■□□□□ 0.5
APH1AQ96BI3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.17■□□□□ 0.5
APH1AQ96BI3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
APH1AQ96BI3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
APH1AQ96BI3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
APH1AQ96BI3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APH1AQ96BI3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.17■□□□□ 0.5
APH1AQ96BI3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
APH1AQ96BI3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
APH1AQ96BI3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.17■□□□□ 0.5
APH1AQ96BI3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
APH1AQ96BI3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APH1AQ96BI3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APH1AQ96BI3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.16■□□□□ 0.5
APH1AQ96BI3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.16■□□□□ 0.5
APH1AQ96BI3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.16■□□□□ 0.5
APH1AQ96BI3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
APH1AQ96BI3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APH1AQ96BI3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APH1AQ96BI3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.16■□□□□ 0.5
APH1AQ96BI3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APH1AQ96BI3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APH1AQ96BI3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.16■□□□□ 0.5
APH1AQ96BI3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.16■□□□□ 0.5
APH1AQ96BI3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
APH1AQ96BI3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APH1AQ96BI3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APH1AQ96BI3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.16■□□□□ 0.5
APH1AQ96BI3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APH1AQ96BI3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.16■□□□□ 0.5
APH1AQ96BI3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.16■□□□□ 0.5
APH1AQ96BI3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
APH1AQ96BI3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APH1AQ96BI3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APH1AQ96BI3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.15■□□□□ 0.5
APH1AQ96BI3 CYP21A1P-202ENST00000354927 1481 ntBASIC18.15■□□□□ 0.5
APH1AQ96BI3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APH1AQ96BI3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.15■□□□□ 0.5
APH1AQ96BI3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APH1AQ96BI3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
APH1AQ96BI3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APH1AQ96BI3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APH1AQ96BI3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.15■□□□□ 0.5
APH1AQ96BI3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APH1AQ96BI3 BX276092.2-201ENST00000417668 665 ntBASIC18.15■□□□□ 0.5
APH1AQ96BI3 PGM5P4-201ENST00000421970 445 ntBASIC18.15■□□□□ 0.5
APH1AQ96BI3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APH1AQ96BI3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.15■□□□□ 0.5
APH1AQ96BI3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.15■□□□□ 0.5
APH1AQ96BI3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.15■□□□□ 0.5
APH1AQ96BI3 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.15■□□□□ 0.5
APH1AQ96BI3 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.15■□□□□ 0.5
APH1AQ96BI3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.15■□□□□ 0.5
APH1AQ96BI3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APH1AQ96BI3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
APH1AQ96BI3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
APH1AQ96BI3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.15■□□□□ 0.5
APH1AQ96BI3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APH1AQ96BI3 AC007375.3-201ENST00000600936 2314 ntBASIC18.15■□□□□ 0.5
APH1AQ96BI3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APH1AQ96BI3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.15■□□□□ 0.5
APH1AQ96BI3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.14■□□□□ 0.5
APH1AQ96BI3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.14■□□□□ 0.49
APH1AQ96BI3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APH1AQ96BI3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.14■□□□□ 0.49
APH1AQ96BI3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
APH1AQ96BI3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APH1AQ96BI3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APH1AQ96BI3 LSM12P1-201ENST00000411836 588 ntBASIC18.14■□□□□ 0.49
APH1AQ96BI3 MIPEPP3-201ENST00000412105 444 ntBASIC18.14■□□□□ 0.49
APH1AQ96BI3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.14■□□□□ 0.49
APH1AQ96BI3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
APH1AQ96BI3 CYP2T3P-201ENST00000601990 817 ntBASIC18.14■□□□□ 0.49
APH1AQ96BI3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
APH1AQ96BI3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
APH1AQ96BI3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APH1AQ96BI3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APH1AQ96BI3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
APH1AQ96BI3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APH1AQ96BI3 AC005229.4-201ENST00000610085 2198 ntBASIC18.14■□□□□ 0.49
APH1AQ96BI3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APH1AQ96BI3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.14■□□□□ 0.49
APH1AQ96BI3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms