Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 AC027612.3-201ENST00000413684 1047 ntBASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 TPRG1LP1-201ENST00000598702 760 ntBASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN4IP1Q8WWV3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 RNF165-205ENST00000588679 2904 ntBASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.21■□□□□ 0.35
RTN4IP1Q8WWV3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.21■□□□□ 0.34
RTN4IP1Q8WWV3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
RTN4IP1Q8WWV3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 ZNRF2P3-201ENST00000424200 374 ntBASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN4IP1Q8WWV3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN4IP1Q8WWV3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms