Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 AL137060.1-201ENST00000618151 2648 ntBASIC20.86■□□□□ 0.93
CHD5Q8TDI0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CHD5Q8TDI0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD5Q8TDI0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CHD5Q8TDI0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.85■□□□□ 0.93
CHD5Q8TDI0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.85■□□□□ 0.93
CHD5Q8TDI0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD5Q8TDI0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD5Q8TDI0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.85■□□□□ 0.93
CHD5Q8TDI0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD5Q8TDI0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD5Q8TDI0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD5Q8TDI0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CHD5Q8TDI0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD5Q8TDI0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD5Q8TDI0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CHD5Q8TDI0 AL121603.2-201ENST00000557373 2117 ntBASIC20.85■□□□□ 0.93
CHD5Q8TDI0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.85■□□□□ 0.93
CHD5Q8TDI0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.85■□□□□ 0.93
CHD5Q8TDI0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 MIPEPP3-201ENST00000412105 444 ntBASIC20.84■□□□□ 0.93
CHD5Q8TDI0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 AC121338.2-201ENST00000622535 1744 ntBASIC20.84■□□□□ 0.93
CHD5Q8TDI0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.84■□□□□ 0.93
CHD5Q8TDI0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD5Q8TDI0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD5Q8TDI0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.83■□□□□ 0.93
CHD5Q8TDI0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD5Q8TDI0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD5Q8TDI0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.83■□□□□ 0.93
CHD5Q8TDI0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHD5Q8TDI0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHD5Q8TDI0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD5Q8TDI0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHD5Q8TDI0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.83■□□□□ 0.92
CHD5Q8TDI0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.83■□□□□ 0.92
CHD5Q8TDI0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.83■□□□□ 0.92
CHD5Q8TDI0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHD5Q8TDI0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHD5Q8TDI0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHD5Q8TDI0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.83■□□□□ 0.92
CHD5Q8TDI0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHD5Q8TDI0 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.83■□□□□ 0.92
CHD5Q8TDI0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHD5Q8TDI0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.83■□□□□ 0.92
CHD5Q8TDI0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHD5Q8TDI0 PTBP1P-201ENST00000554374 1601 ntBASIC20.82■□□□□ 0.92
CHD5Q8TDI0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.82■□□□□ 0.92
CHD5Q8TDI0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.82■□□□□ 0.92
CHD5Q8TDI0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD5Q8TDI0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.82■□□□□ 0.92
CHD5Q8TDI0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.82■□□□□ 0.92
CHD5Q8TDI0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.82■□□□□ 0.92
CHD5Q8TDI0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CHD5Q8TDI0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.82■□□□□ 0.92
CHD5Q8TDI0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.82■□□□□ 0.92
CHD5Q8TDI0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHD5Q8TDI0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
CHD5Q8TDI0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD5Q8TDI0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD5Q8TDI0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD5Q8TDI0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD5Q8TDI0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.81■□□□□ 0.92
CHD5Q8TDI0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.81■□□□□ 0.92
CHD5Q8TDI0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.81■□□□□ 0.92
CHD5Q8TDI0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
CHD5Q8TDI0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD5Q8TDI0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.81■□□□□ 0.92
CHD5Q8TDI0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD5Q8TDI0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD5Q8TDI0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHD5Q8TDI0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.8■□□□□ 0.92
CHD5Q8TDI0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHD5Q8TDI0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.8■□□□□ 0.92
CHD5Q8TDI0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHD5Q8TDI0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.8■□□□□ 0.92
CHD5Q8TDI0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.8■□□□□ 0.92
CHD5Q8TDI0 AC007225.1-201ENST00000566331 1836 ntBASIC20.8■□□□□ 0.92
CHD5Q8TDI0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.8■□□□□ 0.92
CHD5Q8TDI0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.8■□□□□ 0.92
CHD5Q8TDI0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms