Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 AL355001.2-201ENST00000620617 1191 ntBASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RPS4Y2Q8TD47 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RPS4Y2Q8TD47 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 AC099791.1-201ENST00000416440 715 ntBASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 AC142381.2-201ENST00000566120 298 ntBASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPS4Y2Q8TD47 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.94■□□□□ 0.46
RPS4Y2Q8TD47 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.94■□□□□ 0.46
RPS4Y2Q8TD47 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.94■□□□□ 0.46
RPS4Y2Q8TD47 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.94■□□□□ 0.46
RPS4Y2Q8TD47 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4Y2Q8TD47 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.94■□□□□ 0.46
RPS4Y2Q8TD47 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4Y2Q8TD47 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4Y2Q8TD47 POU5F1P4-201ENST00000413175 1085 ntBASIC17.94■□□□□ 0.46
RPS4Y2Q8TD47 AC027682.1-201ENST00000562846 899 ntBASIC17.94■□□□□ 0.46
RPS4Y2Q8TD47 TPRG1LP1-201ENST00000598702 760 ntBASIC17.94■□□□□ 0.46
RPS4Y2Q8TD47 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4Y2Q8TD47 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4Y2Q8TD47 AC125437.2-201ENST00000625180 2167 ntBASIC17.94■□□□□ 0.46
RPS4Y2Q8TD47 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4Y2Q8TD47 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4Y2Q8TD47 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4Y2Q8TD47 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPS4Y2Q8TD47 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 AC008764.7-201ENST00000593779 1081 ntBASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 MIR2861-201ENST00000636310 90 ntBASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPS4Y2Q8TD47 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 AC012414.1-201ENST00000556676 535 ntBASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.92■□□□□ 0.46
RPS4Y2Q8TD47 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.91■□□□□ 0.46
RPS4Y2Q8TD47 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms