Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 DUX4L26-201ENST00000489078 1255 ntBASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 FITM1-202ENST00000559294 800 ntBASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.98□□□□□ -0.17
ALMS1Q8TCU4 AL355355.2-201ENST00000442321 338 ntBASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 LINC01568-207ENST00000641790 1380 ntBASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 KRT18P56-201ENST00000507275 550 ntBASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.97□□□□□ -0.17
ALMS1Q8TCU4 NBPF21P-201ENST00000425093 1451 ntBASIC13.96□□□□□ -0.17
ALMS1Q8TCU4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ALMS1Q8TCU4 UNC93B2-201ENST00000285383 730 ntBASIC13.96□□□□□ -0.17
ALMS1Q8TCU4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ALMS1Q8TCU4 UPK3BP1-201ENST00000428678 509 ntBASIC13.96□□□□□ -0.17
ALMS1Q8TCU4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.96□□□□□ -0.17
ALMS1Q8TCU4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ALMS1Q8TCU4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ALMS1Q8TCU4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ALMS1Q8TCU4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ALMS1Q8TCU4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ALMS1Q8TCU4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ALMS1Q8TCU4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ALMS1Q8TCU4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.96□□□□□ -0.17
ALMS1Q8TCU4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ALMS1Q8TCU4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ALMS1Q8TCU4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
ALMS1Q8TCU4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC13.96□□□□□ -0.17
ALMS1Q8TCU4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
ALMS1Q8TCU4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ALMS1Q8TCU4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ALMS1Q8TCU4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 DUSP5P1-201ENST00000441325 1139 ntBASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 AL031963.3-201ENST00000606441 850 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms