Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.74■■□□□ 1.07
UBA3Q8TBC4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.74■■□□□ 1.07
UBA3Q8TBC4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.74■■□□□ 1.07
UBA3Q8TBC4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.74■■□□□ 1.07
UBA3Q8TBC4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.74■■□□□ 1.07
UBA3Q8TBC4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.74■■□□□ 1.07
UBA3Q8TBC4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.74■■□□□ 1.07
UBA3Q8TBC4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.74■■□□□ 1.07
UBA3Q8TBC4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBA3Q8TBC4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
UBA3Q8TBC4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBA3Q8TBC4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
UBA3Q8TBC4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBA3Q8TBC4 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.73■■□□□ 1.07
UBA3Q8TBC4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.73■■□□□ 1.07
UBA3Q8TBC4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBA3Q8TBC4 AC027702.1-201ENST00000563810 1770 ntBASIC21.73■■□□□ 1.07
UBA3Q8TBC4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.73■■□□□ 1.07
UBA3Q8TBC4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBA3Q8TBC4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
UBA3Q8TBC4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
UBA3Q8TBC4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBA3Q8TBC4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBA3Q8TBC4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.73■■□□□ 1.07
UBA3Q8TBC4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBA3Q8TBC4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
UBA3Q8TBC4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
UBA3Q8TBC4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
UBA3Q8TBC4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 AC105036.2-201ENST00000569468 176 ntBASIC21.72■■□□□ 1.07
UBA3Q8TBC4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 OR10C1-204ENST00000622521 1039 ntBASIC21.72■■□□□ 1.07
UBA3Q8TBC4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 FP700111.2-201ENST00000619190 1892 ntBASIC21.72■■□□□ 1.07
UBA3Q8TBC4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.72■■□□□ 1.07
UBA3Q8TBC4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.71■■□□□ 1.07
UBA3Q8TBC4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.71■■□□□ 1.07
UBA3Q8TBC4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.71■■□□□ 1.07
UBA3Q8TBC4 AC083906.2-201ENST00000511578 360 ntBASIC21.71■■□□□ 1.07
UBA3Q8TBC4 AC133552.2-202ENST00000575694 574 ntBASIC21.71■■□□□ 1.07
UBA3Q8TBC4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.71■■□□□ 1.07
UBA3Q8TBC4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.71■■□□□ 1.07
UBA3Q8TBC4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
UBA3Q8TBC4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBA3Q8TBC4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
UBA3Q8TBC4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
UBA3Q8TBC4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.71■■□□□ 1.07
UBA3Q8TBC4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
UBA3Q8TBC4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBA3Q8TBC4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBA3Q8TBC4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBA3Q8TBC4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBA3Q8TBC4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBA3Q8TBC4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UBA3Q8TBC4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.7■■□□□ 1.06
UBA3Q8TBC4 AL355472.2-201ENST00000422958 438 ntBASIC21.7■■□□□ 1.06
UBA3Q8TBC4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.7■■□□□ 1.06
UBA3Q8TBC4 AF201337.1-201ENST00000520239 748 ntBASIC21.7■■□□□ 1.06
UBA3Q8TBC4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UBA3Q8TBC4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
UBA3Q8TBC4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.7■■□□□ 1.06
UBA3Q8TBC4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.7■■□□□ 1.06
UBA3Q8TBC4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 NCF1B-203ENST00000435988 1254 ntBASIC21.69■■□□□ 1.06
UBA3Q8TBC4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms