Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SIMC1Q8NDZ2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.29■□□□□ 0.68
SIMC1Q8NDZ2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SIMC1Q8NDZ2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SIMC1Q8NDZ2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.29■□□□□ 0.68
SIMC1Q8NDZ2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.29■□□□□ 0.68
SIMC1Q8NDZ2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.29■□□□□ 0.68
SIMC1Q8NDZ2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.29■□□□□ 0.68
SIMC1Q8NDZ2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.29■□□□□ 0.68
SIMC1Q8NDZ2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.29■□□□□ 0.68
SIMC1Q8NDZ2 DUX4L16-201ENST00000555130 1264 ntBASIC19.29■□□□□ 0.68
SIMC1Q8NDZ2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SIMC1Q8NDZ2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.29■□□□□ 0.68
SIMC1Q8NDZ2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SIMC1Q8NDZ2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SIMC1Q8NDZ2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.29■□□□□ 0.68
SIMC1Q8NDZ2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SIMC1Q8NDZ2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 AC006128.1-201ENST00000624704 1661 ntBASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 AC004911.1-201ENST00000416316 871 ntBASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 AC243732.1-201ENST00000612648 864 ntBASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SIMC1Q8NDZ2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIMC1Q8NDZ2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIMC1Q8NDZ2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIMC1Q8NDZ2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIMC1Q8NDZ2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.27■□□□□ 0.68
SIMC1Q8NDZ2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIMC1Q8NDZ2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIMC1Q8NDZ2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.27■□□□□ 0.68
SIMC1Q8NDZ2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.27■□□□□ 0.68
SIMC1Q8NDZ2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SIMC1Q8NDZ2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.27■□□□□ 0.68
SIMC1Q8NDZ2 TERF1P5-201ENST00000477545 1207 ntBASIC19.27■□□□□ 0.68
SIMC1Q8NDZ2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
SIMC1Q8NDZ2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.27■□□□□ 0.68
SIMC1Q8NDZ2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SIMC1Q8NDZ2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIMC1Q8NDZ2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
SIMC1Q8NDZ2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.27■□□□□ 0.68
SIMC1Q8NDZ2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SIMC1Q8NDZ2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SIMC1Q8NDZ2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.27■□□□□ 0.67
SIMC1Q8NDZ2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 AC011484.1-201ENST00000377652 1995 ntBASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 KRT18P11-201ENST00000435214 1283 ntBASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 CNN2P6-201ENST00000439038 900 ntBASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SIMC1Q8NDZ2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SIMC1Q8NDZ2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SIMC1Q8NDZ2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIMC1Q8NDZ2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.25■□□□□ 0.67
SIMC1Q8NDZ2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIMC1Q8NDZ2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.25■□□□□ 0.67
SIMC1Q8NDZ2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms