Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
RASGEF1AQ8N9B8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RASGEF1AQ8N9B8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RASGEF1AQ8N9B8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RASGEF1AQ8N9B8 MCRIP2P1-201ENST00000394346 511 ntBASIC20.23■□□□□ 0.83
RASGEF1AQ8N9B8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.23■□□□□ 0.83
RASGEF1AQ8N9B8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.23■□□□□ 0.83
RASGEF1AQ8N9B8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.23■□□□□ 0.83
RASGEF1AQ8N9B8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.23■□□□□ 0.83
RASGEF1AQ8N9B8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
RASGEF1AQ8N9B8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RASGEF1AQ8N9B8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RASGEF1AQ8N9B8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.23■□□□□ 0.83
RASGEF1AQ8N9B8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RASGEF1AQ8N9B8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RASGEF1AQ8N9B8 AC006128.1-201ENST00000624704 1661 ntBASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 SLC29A4P1-201ENST00000398760 971 ntBASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 CYP2T3P-201ENST00000601990 817 ntBASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.22■□□□□ 0.83
RASGEF1AQ8N9B8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RASGEF1AQ8N9B8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RASGEF1AQ8N9B8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
RASGEF1AQ8N9B8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RASGEF1AQ8N9B8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RASGEF1AQ8N9B8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
RASGEF1AQ8N9B8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.21■□□□□ 0.83
RASGEF1AQ8N9B8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RASGEF1AQ8N9B8 MIPEPP3-201ENST00000412105 444 ntBASIC20.21■□□□□ 0.83
RASGEF1AQ8N9B8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.21■□□□□ 0.83
RASGEF1AQ8N9B8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.21■□□□□ 0.83
RASGEF1AQ8N9B8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.21■□□□□ 0.83
RASGEF1AQ8N9B8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.21■□□□□ 0.83
RASGEF1AQ8N9B8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.21■□□□□ 0.83
RASGEF1AQ8N9B8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.21■□□□□ 0.83
RASGEF1AQ8N9B8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RASGEF1AQ8N9B8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.21■□□□□ 0.83
RASGEF1AQ8N9B8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.21■□□□□ 0.83
RASGEF1AQ8N9B8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.2■□□□□ 0.83
RASGEF1AQ8N9B8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 BX276092.2-201ENST00000417668 665 ntBASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 AL138781.1-201ENST00000566567 1274 ntBASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RASGEF1AQ8N9B8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RASGEF1AQ8N9B8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RASGEF1AQ8N9B8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RASGEF1AQ8N9B8 KRT17P1-201ENST00000399211 1546 ntBASIC20.19■□□□□ 0.82
RASGEF1AQ8N9B8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.19■□□□□ 0.82
RASGEF1AQ8N9B8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RASGEF1AQ8N9B8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RASGEF1AQ8N9B8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.19■□□□□ 0.82
RASGEF1AQ8N9B8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.19■□□□□ 0.82
RASGEF1AQ8N9B8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.19■□□□□ 0.82
RASGEF1AQ8N9B8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.19■□□□□ 0.82
RASGEF1AQ8N9B8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RASGEF1AQ8N9B8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RASGEF1AQ8N9B8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RASGEF1AQ8N9B8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.19■□□□□ 0.82
RASGEF1AQ8N9B8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.19■□□□□ 0.82
RASGEF1AQ8N9B8 AC087633.2-202ENST00000565166 1439 ntBASIC20.19■□□□□ 0.82
RASGEF1AQ8N9B8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RASGEF1AQ8N9B8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms