Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC89Q8N998 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC89Q8N998 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC89Q8N998 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC89Q8N998 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC89Q8N998 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC89Q8N998 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC89Q8N998 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC89Q8N998 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC89Q8N998 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC89Q8N998 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC89Q8N998 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CCDC89Q8N998 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC89Q8N998 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC89Q8N998 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
CCDC89Q8N998 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC89Q8N998 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC89Q8N998 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC89Q8N998 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC89Q8N998 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CCDC89Q8N998 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC89Q8N998 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC89Q8N998 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC89Q8N998 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC89Q8N998 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC89Q8N998 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC89Q8N998 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CCDC89Q8N998 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC89Q8N998 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC89Q8N998 IRS3P-201ENST00000223076 1006 ntBASIC21.23■□□□□ 0.99
CCDC89Q8N998 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC89Q8N998 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC89Q8N998 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC89Q8N998 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CCDC89Q8N998 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC89Q8N998 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC89Q8N998 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC89Q8N998 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CCDC89Q8N998 AL512408.1-201ENST00000569378 2000 ntBASIC21.22■□□□□ 0.99
CCDC89Q8N998 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.22■□□□□ 0.99
CCDC89Q8N998 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC89Q8N998 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC89Q8N998 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC89Q8N998 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC89Q8N998 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CCDC89Q8N998 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC89Q8N998 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC89Q8N998 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC89Q8N998 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC89Q8N998 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.22■□□□□ 0.99
CCDC89Q8N998 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC89Q8N998 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.22■□□□□ 0.99
CCDC89Q8N998 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.22■□□□□ 0.99
CCDC89Q8N998 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCDC89Q8N998 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CCDC89Q8N998 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC89Q8N998 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC89Q8N998 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC89Q8N998 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC89Q8N998 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC89Q8N998 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC89Q8N998 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC89Q8N998 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC89Q8N998 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC89Q8N998 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CCDC89Q8N998 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC89Q8N998 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC89Q8N998 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC89Q8N998 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CCDC89Q8N998 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC89Q8N998 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC89Q8N998 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC89Q8N998 AC105265.2-201ENST00000467189 838 ntBASIC21.21■□□□□ 0.99
CCDC89Q8N998 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC89Q8N998 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC89Q8N998 AC005837.3-201ENST00000612163 286 ntBASIC21.21■□□□□ 0.99
CCDC89Q8N998 PCDHAC2-203ENST00000615316 3011 ntBASIC21.21■□□□□ 0.99
CCDC89Q8N998 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CCDC89Q8N998 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC89Q8N998 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CCDC89Q8N998 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC89Q8N998 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC89Q8N998 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CCDC89Q8N998 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC89Q8N998 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC89Q8N998 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC89Q8N998 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC89Q8N998 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC89Q8N998 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC89Q8N998 AC120498.10-201ENST00000621827 505 ntBASIC21.2■□□□□ 0.98
CCDC89Q8N998 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC89Q8N998 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC89Q8N998 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC89Q8N998 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC89Q8N998 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC89Q8N998 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC89Q8N998 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC89Q8N998 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC89Q8N998 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC89Q8N998 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms