Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH20Q8N6Y1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 AC073210.2-201ENST00000430369 194 ntBASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 MIR4758-201ENST00000577688 71 ntBASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH20Q8N6Y1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH20Q8N6Y1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH20Q8N6Y1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH20Q8N6Y1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDH20Q8N6Y1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH20Q8N6Y1 BX276092.2-201ENST00000417668 665 ntBASIC20.91■□□□□ 0.94
PCDH20Q8N6Y1 AC069152.1-201ENST00000438030 544 ntBASIC20.91■□□□□ 0.94
PCDH20Q8N6Y1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PCDH20Q8N6Y1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH20Q8N6Y1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
PCDH20Q8N6Y1 AC092118.2-201ENST00000613495 667 ntBASIC20.91■□□□□ 0.94
PCDH20Q8N6Y1 AC133041.1-202ENST00000642053 222 ntBASIC20.91■□□□□ 0.94
PCDH20Q8N6Y1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH20Q8N6Y1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 MCRIP2P1-201ENST00000394346 511 ntBASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH20Q8N6Y1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
PCDH20Q8N6Y1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
PCDH20Q8N6Y1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PCDH20Q8N6Y1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.89■□□□□ 0.94
PCDH20Q8N6Y1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH20Q8N6Y1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH20Q8N6Y1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDH20Q8N6Y1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDH20Q8N6Y1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH20Q8N6Y1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH20Q8N6Y1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms