Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF7Q8N684 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF7Q8N684 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF7Q8N684 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF7Q8N684 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.03■□□□□ 0.8
CPSF7Q8N684 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF7Q8N684 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF7Q8N684 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.02■□□□□ 0.8
CPSF7Q8N684 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF7Q8N684 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF7Q8N684 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.02■□□□□ 0.8
CPSF7Q8N684 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.02■□□□□ 0.8
CPSF7Q8N684 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
CPSF7Q8N684 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.02■□□□□ 0.8
CPSF7Q8N684 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.02■□□□□ 0.8
CPSF7Q8N684 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF7Q8N684 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.02■□□□□ 0.8
CPSF7Q8N684 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CPSF7Q8N684 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.02■□□□□ 0.8
CPSF7Q8N684 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF7Q8N684 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.02■□□□□ 0.8
CPSF7Q8N684 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPSF7Q8N684 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPSF7Q8N684 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPSF7Q8N684 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPSF7Q8N684 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPSF7Q8N684 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPSF7Q8N684 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.02■□□□□ 0.79
CPSF7Q8N684 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.02■□□□□ 0.79
CPSF7Q8N684 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF7Q8N684 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF7Q8N684 FP700111.2-201ENST00000619190 1892 ntBASIC20.01■□□□□ 0.79
CPSF7Q8N684 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CPSF7Q8N684 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.01■□□□□ 0.79
CPSF7Q8N684 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.01■□□□□ 0.79
CPSF7Q8N684 AC112907.3-201ENST00000577781 2400 ntBASIC20.01■□□□□ 0.79
CPSF7Q8N684 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.01■□□□□ 0.79
CPSF7Q8N684 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.01■□□□□ 0.79
CPSF7Q8N684 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.01■□□□□ 0.79
CPSF7Q8N684 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.01■□□□□ 0.79
CPSF7Q8N684 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF7Q8N684 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.01■□□□□ 0.79
CPSF7Q8N684 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CPSF7Q8N684 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF7Q8N684 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.01■□□□□ 0.79
CPSF7Q8N684 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF7Q8N684 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20■□□□□ 0.79
CPSF7Q8N684 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20■□□□□ 0.79
CPSF7Q8N684 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF7Q8N684 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20■□□□□ 0.79
CPSF7Q8N684 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF7Q8N684 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20■□□□□ 0.79
CPSF7Q8N684 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20■□□□□ 0.79
CPSF7Q8N684 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20■□□□□ 0.79
CPSF7Q8N684 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20■□□□□ 0.79
CPSF7Q8N684 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20■□□□□ 0.79
CPSF7Q8N684 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20■□□□□ 0.79
CPSF7Q8N684 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF7Q8N684 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF7Q8N684 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPSF7Q8N684 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20■□□□□ 0.79
CPSF7Q8N684 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF7Q8N684 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF7Q8N684 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF7Q8N684 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF7Q8N684 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CPSF7Q8N684 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.99■□□□□ 0.79
CPSF7Q8N684 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF7Q8N684 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF7Q8N684 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF7Q8N684 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF7Q8N684 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF7Q8N684 BX005040.4-201ENST00000637145 1518 ntBASIC19.99■□□□□ 0.79
CPSF7Q8N684 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CPSF7Q8N684 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF7Q8N684 KRT18P14-201ENST00000534205 1250 ntBASIC19.99■□□□□ 0.79
CPSF7Q8N684 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.99■□□□□ 0.79
CPSF7Q8N684 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.99■□□□□ 0.79
CPSF7Q8N684 AC022517.1-201ENST00000592429 346 ntBASIC19.99■□□□□ 0.79
CPSF7Q8N684 IKBKGP1-201ENST00000612193 1073 ntBASIC19.99■□□□□ 0.79
CPSF7Q8N684 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CPSF7Q8N684 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF7Q8N684 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF7Q8N684 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF7Q8N684 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF7Q8N684 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.99■□□□□ 0.79
CPSF7Q8N684 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CPSF7Q8N684 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.99■□□□□ 0.79
CPSF7Q8N684 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF7Q8N684 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CPSF7Q8N684 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.98■□□□□ 0.79
CPSF7Q8N684 LINC02228-203ENST00000641970 1355 ntBASIC19.98■□□□□ 0.79
CPSF7Q8N684 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.98■□□□□ 0.79
CPSF7Q8N684 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF7Q8N684 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.98■□□□□ 0.79
CPSF7Q8N684 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.98■□□□□ 0.79
CPSF7Q8N684 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF7Q8N684 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF7Q8N684 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.98■□□□□ 0.79
CPSF7Q8N684 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms